| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968030
Identifier: 123968030
GI number: 123968030
Start: 428880
End: 429518
Strand: Direct
Name: 123968030
Synonym: A9601_04931
Alternate gene names: NA
Gene position: 428880-429518 (Clockwise)
Preceding gene: 123968029
Following gene: 123968031
Centisome position: 25.68
GC content: 31.46
Gene sequence:
>639_bases ATGAAAATAACATCAAAAACTGAAGCATTAAATATTGTCGAAACCTCTTATTTAGCATCTCTTTCGTCTTTATTATGGGT TGCATTATATTATCTGCCAATTGGGGGAGCTTTATTAAGGTTGATTTTGCCTCTCCCAATGATCTTGTTGCACTTGAGAA GAGGATCTAAAATTGCATTGGAAGGACTTTTAATACAATTTCTACTTTTATTCATAATTATGGGTCCTGTTAGAGGAACT TTATTTTTATTTCCTTATGGTATCTTGGCTTTTTGGTTAGGTTGGTGTTGGTTTAAAGAAAAGAGTTGGAAACTTAGTTT AACTGGGGGAGTTGTTATTGGAACCCTTGGCTTCTTACTAAGAGTAATAGCATTATCTACGTTGGTAGGAGATAATCTTT GGGTCCTAATTACTCGAGCGAGTTATGGTCTAATAGAAAAGTTCATTGGATTATTTAATTTACCTTTATATCCCTCAATT TTGAGTATACAATTTGGTGCAATTTTATTAATAATTTTTCAAGAAATAGTTTATGTCTTAACGGTACATGTAGTTGCCTA TTGTCTTTTTCCTAGATTTAAATTAACCATCCCAGATCCTCCAAGATTATTAAATAGCTTAGTTGATTTTAATAATTAA
Upstream 100 bases:
>100_bases GTAATTCTGAGGTAAATTTTGAAATAGAAAAGATTGAACGTATCTTAGATTCAAAAAATAAAAGTATGAATAAAAATTAA TTAAAAATATTCAACAAAAA
Downstream 100 bases:
>100_bases AAAAAAGTAAGAATGTACAGTAAAGAATTAGGGATAAATTTTTTTGGTAATGAATCCAATAAAAAAAGACAACTTAATAA GATAGAAATACTGAAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MKITSKTEALNIVETSYLASLSSLLWVALYYLPIGGALLRLILPLPMILLHLRRGSKIALEGLLIQFLLLFIIMGPVRGT LFLFPYGILAFWLGWCWFKEKSWKLSLTGGVVIGTLGFLLRVIALSTLVGDNLWVLITRASYGLIEKFIGLFNLPLYPSI LSIQFGAILLIIFQEIVYVLTVHVVAYCLFPRFKLTIPDPPRLLNSLVDFNN
Sequences:
>Translated_212_residues MKITSKTEALNIVETSYLASLSSLLWVALYYLPIGGALLRLILPLPMILLHLRRGSKIALEGLLIQFLLLFIIMGPVRGT LFLFPYGILAFWLGWCWFKEKSWKLSLTGGVVIGTLGFLLRVIALSTLVGDNLWVLITRASYGLIEKFIGLFNLPLYPSI LSIQFGAILLIIFQEIVYVLTVHVVAYCLFPRFKLTIPDPPRLLNSLVDFNN >Mature_212_residues MKITSKTEALNIVETSYLASLSSLLWVALYYLPIGGALLRLILPLPMILLHLRRGSKIALEGLLIQFLLLFIIMGPVRGT LFLFPYGILAFWLGWCWFKEKSWKLSLTGGVVIGTLGFLLRVIALSTLVGDNLWVLITRASYGLIEKFIGLFNLPLYPSI LSIQFGAILLIIFQEIVYVLTVHVVAYCLFPRFKLTIPDPPRLLNSLVDFNN
Specific function: Unknown
COG id: COG4241
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23870; Mature: 23870
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITSKTEALNIVETSYLASLSSLLWVALYYLPIGGALLRLILPLPMILLHLRRGSKIAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH EGLLIQFLLLFIIMGPVRGTLFLFPYGILAFWLGWCWFKEKSWKLSLTGGVVIGTLGFLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH RVIALSTLVGDNLWVLITRASYGLIEKFIGLFNLPLYPSILSIQFGAILLIIFQEIVYVL HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH TVHVVAYCLFPRFKLTIPDPPRLLNSLVDFNN HHHHHHHHHCCCCEEECCCCHHHHHHHHCCCC >Mature Secondary Structure MKITSKTEALNIVETSYLASLSSLLWVALYYLPIGGALLRLILPLPMILLHLRRGSKIAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH EGLLIQFLLLFIIMGPVRGTLFLFPYGILAFWLGWCWFKEKSWKLSLTGGVVIGTLGFLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH RVIALSTLVGDNLWVLITRASYGLIEKFIGLFNLPLYPSILSIQFGAILLIIFQEIVYVL HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH TVHVVAYCLFPRFKLTIPDPPRLLNSLVDFNN HHHHHHHHHCCCCEEECCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA