Click here to switch to the map view.

The map label for this gene is sun [H]

Identifier: 123968018

GI number: 123968018

Start: 416073

End: 417389

Strand: Direct

Name: sun [H]

Synonym: A9601_04811

Alternate gene names: 123968018

Gene position: 416073-417389 (Clockwise)

Preceding gene: 123968017

Following gene: 123968022

Centisome position: 24.92

GC content: 29.46

Gene sequence:

>1317_bases
TTGAGCATAGGATATTTACAAAGAAAGGCAGCTTGGGAAATTTTATTAAAAGTTAGTTCGGGTGATTTTTCTGATCATGC
TCTTGAAAAGGTTTTAAAAAATTATCAATTTAATCCTCTTGATATAGCTTTTATTACGGAATTATCTTTTGGATGCATAA
GGTATAGAAAATTTCTTGATCTTTGGACGGATCATACATCAAAAATTACTCATAAAAAGCAGCCTCCAAAGTTAAGATGG
CTTCTACATATAGGTTTATATCAACTATTGAAAATGGATAAAATTCCATTTCCTGCTGCTATTACTACGACTGTAGAAGT
AGCTAAAAAAACAGATTTAAATGGTTTAGCGGGAACTGTAAATGCGATATTGAGAAATGCATCAAGAAAATTAGAACAAA
AAATATTTCCGGAATTATCATCTGATAGAAAAGAAAGAATTTCATATCTTGAATCATTCCCATTATGGCTTGTGAAGGAT
CTTTATAAATGGGTCGGTAATAGTGAGGGTGAAAATATCATTAGGGCATTTAATAAAAAACCATCAATTGATTTGAGAAT
TAACCAATTAAAAACTAATTTAGATAACTTTTTGAAAGTACTTCATGAAAATAAAATTGATGCTGAAATTATTAATGATT
TAAATAATGGAATTACTTTAAAATCTAATCCAAGATCTATAAAAAATTTACCAGGATATAGTGATGGGCTTTGGACAATT
CAAGATAGATCTTCTCAATGGATAGCACCTCTCTTAAATCCAAAAGAAGGTGAAAAGATTTTAGATGCTTGTGCAGCTCC
AGGAAGTAAGTCTACCCACCTTGCAGAATTAACAAATGATAGTGCTGAAATAATTGCCGTAGATAGATCAGCAAAAAGAT
TAAAAATACTGCAATCAAATTTAGAAAGGTTAAATTTGAAATCTGTTAATACCCTTAAGGCTGATGCTACGAGGTTGATT
GAATTAAATCCTAAGTTTATTTCTTATTTTGATAAGATTTTATTAGATGCTCCATGTTCAGGCATTGGAACTCTTTCCAG
GAATCCAGATTCTAGATGGTCTTTAAGTAAAGAAAAAATAAAATCTTTAACTTTATTACAGGGAAAACTTTTGGAGAGTA
TTTTACCTCTTTTGAAAAAAGATGGCACTTTAGTTTATTCAACTTGTACTATTTGTCCCGATGAAAATAATCTATTAATT
GAACGATTTATTGAAAAAAACAAAACTTTAAAATTGGTTAGCCAAAAGCAAATTTTACCTAGCTTGGATTATCCTGGTGA
TGGATTTTATTCTGCAATAATTTCTTATAAATCTTAA

Upstream 100 bases:

>100_bases
TATCTTAGGTTTTATTTGGTTTAATTCTGCAATTGAAAAAGTAGTTTAAATTTTTGAATTTTTTGTATATTAAAGTTATC
TTTAAAAAATTAATTACATT

Downstream 100 bases:

>100_bases
AAATATAATTTATTTTTTAATTTGAATTTTATAAATTTCAGATATGAACTTCTTCCATAAATAAGCTGCATTCCCACTAG
ATAATTCAGTTTCCTTGTTA

Product: Sun protein (Fmu protein)

Products: NA

Alternate protein names: rRNA (cytosine-C(5)-)-methyltransferase rsmB [H]

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MSIGYLQRKAAWEILLKVSSGDFSDHALEKVLKNYQFNPLDIAFITELSFGCIRYRKFLDLWTDHTSKITHKKQPPKLRW
LLHIGLYQLLKMDKIPFPAAITTTVEVAKKTDLNGLAGTVNAILRNASRKLEQKIFPELSSDRKERISYLESFPLWLVKD
LYKWVGNSEGENIIRAFNKKPSIDLRINQLKTNLDNFLKVLHENKIDAEIINDLNNGITLKSNPRSIKNLPGYSDGLWTI
QDRSSQWIAPLLNPKEGEKILDACAAPGSKSTHLAELTNDSAEIIAVDRSAKRLKILQSNLERLNLKSVNTLKADATRLI
ELNPKFISYFDKILLDAPCSGIGTLSRNPDSRWSLSKEKIKSLTLLQGKLLESILPLLKKDGTLVYSTCTICPDENNLLI
ERFIEKNKTLKLVSQKQILPSLDYPGDGFYSAIISYKS

Sequences:

>Translated_438_residues
MSIGYLQRKAAWEILLKVSSGDFSDHALEKVLKNYQFNPLDIAFITELSFGCIRYRKFLDLWTDHTSKITHKKQPPKLRW
LLHIGLYQLLKMDKIPFPAAITTTVEVAKKTDLNGLAGTVNAILRNASRKLEQKIFPELSSDRKERISYLESFPLWLVKD
LYKWVGNSEGENIIRAFNKKPSIDLRINQLKTNLDNFLKVLHENKIDAEIINDLNNGITLKSNPRSIKNLPGYSDGLWTI
QDRSSQWIAPLLNPKEGEKILDACAAPGSKSTHLAELTNDSAEIIAVDRSAKRLKILQSNLERLNLKSVNTLKADATRLI
ELNPKFISYFDKILLDAPCSGIGTLSRNPDSRWSLSKEKIKSLTLLQGKLLESILPLLKKDGTLVYSTCTICPDENNLLI
ERFIEKNKTLKLVSQKQILPSLDYPGDGFYSAIISYKS
>Mature_437_residues
SIGYLQRKAAWEILLKVSSGDFSDHALEKVLKNYQFNPLDIAFITELSFGCIRYRKFLDLWTDHTSKITHKKQPPKLRWL
LHIGLYQLLKMDKIPFPAAITTTVEVAKKTDLNGLAGTVNAILRNASRKLEQKIFPELSSDRKERISYLESFPLWLVKDL
YKWVGNSEGENIIRAFNKKPSIDLRINQLKTNLDNFLKVLHENKIDAEIINDLNNGITLKSNPRSIKNLPGYSDGLWTIQ
DRSSQWIAPLLNPKEGEKILDACAAPGSKSTHLAELTNDSAEIIAVDRSAKRLKILQSNLERLNLKSVNTLKADATRLIE
LNPKFISYFDKILLDAPCSGIGTLSRNPDSRWSLSKEKIKSLTLLQGKLLESILPLLKKDGTLVYSTCTICPDENNLLIE
RFIEKNKTLKLVSQKQILPSLDYPGDGFYSAIISYKS

Specific function: Unknown

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI32698918, Length=205, Percent_Identity=37.5609756097561, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI76150625, Length=252, Percent_Identity=31.3492063492063, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI76150623, Length=252, Percent_Identity=31.3492063492063, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI270288818, Length=183, Percent_Identity=34.4262295081967, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI8922322, Length=183, Percent_Identity=34.4262295081967, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI270288816, Length=183, Percent_Identity=34.4262295081967, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI23199998, Length=183, Percent_Identity=34.4262295081967, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI39995082, Length=194, Percent_Identity=34.5360824742268, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI301336155, Length=194, Percent_Identity=34.5360824742268, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI11545785, Length=169, Percent_Identity=32.5443786982249, Blast_Score=73, Evalue=7e-13,
Organism=Escherichia coli, GI2367212, Length=401, Percent_Identity=35.6608478802993, Blast_Score=215, Evalue=4e-57,
Organism=Escherichia coli, GI87081985, Length=270, Percent_Identity=28.8888888888889, Blast_Score=106, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17536757, Length=234, Percent_Identity=29.4871794871795, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI115534021, Length=195, Percent_Identity=31.2820512820513, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71998419, Length=195, Percent_Identity=31.2820512820513, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI25143471, Length=181, Percent_Identity=33.1491712707182, Blast_Score=86, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6324268, Length=293, Percent_Identity=27.6450511945392, Blast_Score=114, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6319447, Length=185, Percent_Identity=34.0540540540541, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6324306, Length=230, Percent_Identity=26.5217391304348, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI22024126, Length=229, Percent_Identity=31.8777292576419, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI21356513, Length=224, Percent_Identity=34.8214285714286, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24668781, Length=225, Percent_Identity=34.6666666666667, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI21355201, Length=194, Percent_Identity=34.5360824742268, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI21356579, Length=198, Percent_Identity=26.7676767676768, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI19920494, Length=181, Percent_Identity=32.5966850828729, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR006027
- InterPro:   IPR004573 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu; PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 49667; Mature: 49536

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS01153 NOL1_NOP2_SUN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGYLQRKAAWEILLKVSSGDFSDHALEKVLKNYQFNPLDIAFITELSFGCIRYRKFLD
CCCCHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH
LWTDHTSKITHKKQPPKLRWLLHIGLYQLLKMDKIPFPAAITTTVEVAKKTDLNGLAGTV
HHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHH
NAILRNASRKLEQKIFPELSSDRKERISYLESFPLWLVKDLYKWVGNSEGENIIRAFNKK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHCCC
PSIDLRINQLKTNLDNFLKVLHENKIDAEIINDLNNGITLKSNPRSIKNLPGYSDGLWTI
CCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCHHHCCCCCCCCEEEE
QDRSSQWIAPLLNPKEGEKILDACAAPGSKSTHLAELTNDSAEIIAVDRSAKRLKILQSN
ECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHH
LERLNLKSVNTLKADATRLIELNPKFISYFDKILLDAPCSGIGTLSRNPDSRWSLSKEKI
HHHCCCCCCHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
KSLTLLQGKLLESILPLLKKDGTLVYSTCTICPDENNLLIERFIEKNKTLKLVSQKQILP
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEHHHHHHHCC
SLDYPGDGFYSAIISYKS
CCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
SIGYLQRKAAWEILLKVSSGDFSDHALEKVLKNYQFNPLDIAFITELSFGCIRYRKFLD
CCCHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH
LWTDHTSKITHKKQPPKLRWLLHIGLYQLLKMDKIPFPAAITTTVEVAKKTDLNGLAGTV
HHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHH
NAILRNASRKLEQKIFPELSSDRKERISYLESFPLWLVKDLYKWVGNSEGENIIRAFNKK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHCCC
PSIDLRINQLKTNLDNFLKVLHENKIDAEIINDLNNGITLKSNPRSIKNLPGYSDGLWTI
CCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCHHHCCCCCCCCEEEE
QDRSSQWIAPLLNPKEGEKILDACAAPGSKSTHLAELTNDSAEIIAVDRSAKRLKILQSN
ECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHH
LERLNLKSVNTLKADATRLIELNPKFISYFDKILLDAPCSGIGTLSRNPDSRWSLSKEKI
HHHCCCCCCHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
KSLTLLQGKLLESILPLLKKDGTLVYSTCTICPDENNLLIERFIEKNKTLKLVSQKQILP
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEHHHHHHHCC
SLDYPGDGFYSAIISYKS
CCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]