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The map label for this gene is 123968015

Identifier: 123968015

GI number: 123968015

Start: 414083

End: 415573

Strand: Direct

Name: 123968015

Synonym: A9601_04781

Alternate gene names: NA

Gene position: 414083-415573 (Clockwise)

Preceding gene: 123968014

Following gene: 123968016

Centisome position: 24.8

GC content: 27.1

Gene sequence:

>1491_bases
ATGAAACAAGTATCAATTATTTTCCCGAATCAACTTTTTAGAGAAAGCCCAATCTTAAAAATAAATTGTGAAGTTTTGAT
TTTGGAAGACTCATTATTTTTTGGAAATGATAAATTTCATAAATTAATTAACCATAAAAATAAGTTAGTTTTTCATAGAG
CATCTATGCTCGCTTATAAAAATTATTTAGAAATATCTGGCTTTAAAGTTTTGTATATCGAAAACAAGAATAATGTTTCT
ACAGTTGATTACTTATCGGAATTTATTAAAAATAAATATCAGAAAATAAATCTCATTGACCCTCATGATTTTTTAATAAT
GAAGAGGATTAATAATTTTGTTGAAAGTAATAATTTAACTTTAAATATTTTGCCTTCTCCTATGTTTATGAGCAGTGAAG
ATTTAAAAAATTTATTTGTATCAAATGCAAAAAAACCTCTTATGGGGAGATTTTATGAGAATCAAAGAAAGAGCCAAAAG
ATATTAGTTAATTCTGATGATACACCTGAAGGTGGTAAATGGAGTTTTGATGAAATGAACAGAAAAAAATTACCAAAAAA
AATAAATATACCCGACACACCAAAATTACAAAAAAATAAATTTGTAGTTAATGCAGAAAGGTCATTAGCTAATTTTGATA
TTGAGTTTATTGGAGAAAGTAATAACTTTTTATATCCAACTAATTTTGAAGAGGCAGATGAATGGTTAAATGATTTTTTT
AAACATAAATTTTTCTTATTTGGAGATTATGAGGATGCTATTTCTAAAGAAAATTCTTTTTTATGGCACAGTTTACTTTC
TCCTCTTTTAAATAGCGGCTTATTAACCCCAGATGTAGTAGTAAATAAAGCATTACTTTTTGCAAAAAATAATAATGTTC
CTATTAACTCTTTAGAGGGTTTTATTCGTCAAATTATTGGATGGAGAGAATTTATTTGCCTCGTCTATAAAAAGTACGGA
ACAAAGATGCGAAATAGTAATTTTTGGAATTTTGAAGATAAGCCAATTCCAAAATCTTTTTATCAAGGAAATACAGGAAT
TGAACCAGTAGACGTTGTTATAAAAAATATTATTAAATTTGGTTATTGTCATCATATTGAGCGGCTAATGATTGTTGGCA
ACTTTATGCTTCTATGTAGAATTCACCCCAACCAAGTTTATAAATGGTTTATGGAAATGTTTATTGATTCCTATGATTGG
GTTATGGTCCCAAATGTTTACGGAATGAGTCAGTTTAGTGATGGTGGTATCTTTTCAACAAAGCCATATATATCAAGCTC
TAATTATGTAAAAAAAATGTCTAATTTTAAAAGTGGTCTATGGTGCGAAATATGGGATGGCTTATTTTGGAAATTTATTA
AAGATAATGAAAGCTTTTTTAGAAAGCAATATCGTCTGGCAATGTTAACGAGAAATCTCGATAAAATGTCAGCGGAAAAA
TTAAATAATCACTTAAAAAAGGCCGATAAATTTTTAAGAGATATTCAATAA

Upstream 100 bases:

>100_bases
CTGTTTGCAATAGGCCATTTGAGTGGCGTAAAAAATGGAAAAACTGTTGGGATGAAGTTATCTACTGTTCAAAAAGATGC
AGTAACAGGAAGTCGCAAAG

Downstream 100 bases:

>100_bases
ATTAAGAGTAATAATCTACAGTTGTCTTTGAAAAATTAAAAGAATATTATGTTATGAATAAATATTAAGTACGGATGTTA
ACTTAGAAAAAATTAGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MKQVSIIFPNQLFRESPILKINCEVLILEDSLFFGNDKFHKLINHKNKLVFHRASMLAYKNYLEISGFKVLYIENKNNVS
TVDYLSEFIKNKYQKINLIDPHDFLIMKRINNFVESNNLTLNILPSPMFMSSEDLKNLFVSNAKKPLMGRFYENQRKSQK
ILVNSDDTPEGGKWSFDEMNRKKLPKKINIPDTPKLQKNKFVVNAERSLANFDIEFIGESNNFLYPTNFEEADEWLNDFF
KHKFFLFGDYEDAISKENSFLWHSLLSPLLNSGLLTPDVVVNKALLFAKNNNVPINSLEGFIRQIIGWREFICLVYKKYG
TKMRNSNFWNFEDKPIPKSFYQGNTGIEPVDVVIKNIIKFGYCHHIERLMIVGNFMLLCRIHPNQVYKWFMEMFIDSYDW
VMVPNVYGMSQFSDGGIFSTKPYISSSNYVKKMSNFKSGLWCEIWDGLFWKFIKDNESFFRKQYRLAMLTRNLDKMSAEK
LNNHLKKADKFLRDIQ

Sequences:

>Translated_496_residues
MKQVSIIFPNQLFRESPILKINCEVLILEDSLFFGNDKFHKLINHKNKLVFHRASMLAYKNYLEISGFKVLYIENKNNVS
TVDYLSEFIKNKYQKINLIDPHDFLIMKRINNFVESNNLTLNILPSPMFMSSEDLKNLFVSNAKKPLMGRFYENQRKSQK
ILVNSDDTPEGGKWSFDEMNRKKLPKKINIPDTPKLQKNKFVVNAERSLANFDIEFIGESNNFLYPTNFEEADEWLNDFF
KHKFFLFGDYEDAISKENSFLWHSLLSPLLNSGLLTPDVVVNKALLFAKNNNVPINSLEGFIRQIIGWREFICLVYKKYG
TKMRNSNFWNFEDKPIPKSFYQGNTGIEPVDVVIKNIIKFGYCHHIERLMIVGNFMLLCRIHPNQVYKWFMEMFIDSYDW
VMVPNVYGMSQFSDGGIFSTKPYISSSNYVKKMSNFKSGLWCEIWDGLFWKFIKDNESFFRKQYRLAMLTRNLDKMSAEK
LNNHLKKADKFLRDIQ
>Mature_496_residues
MKQVSIIFPNQLFRESPILKINCEVLILEDSLFFGNDKFHKLINHKNKLVFHRASMLAYKNYLEISGFKVLYIENKNNVS
TVDYLSEFIKNKYQKINLIDPHDFLIMKRINNFVESNNLTLNILPSPMFMSSEDLKNLFVSNAKKPLMGRFYENQRKSQK
ILVNSDDTPEGGKWSFDEMNRKKLPKKINIPDTPKLQKNKFVVNAERSLANFDIEFIGESNNFLYPTNFEEADEWLNDFF
KHKFFLFGDYEDAISKENSFLWHSLLSPLLNSGLLTPDVVVNKALLFAKNNNVPINSLEGFIRQIIGWREFICLVYKKYG
TKMRNSNFWNFEDKPIPKSFYQGNTGIEPVDVVIKNIIKFGYCHHIERLMIVGNFMLLCRIHPNQVYKWFMEMFIDSYDW
VMVPNVYGMSQFSDGGIFSTKPYISSSNYVKKMSNFKSGLWCEIWDGLFWKFIKDNESFFRKQYRLAMLTRNLDKMSAEK
LNNHLKKADKFLRDIQ

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58555; Mature: 58555

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVSIIFPNQLFRESPILKINCEVLILEDSLFFGNDKFHKLINHKNKLVFHRASMLAYK
CCEEEEECCHHHHHCCCEEEEEEEEEEEECCEEECCHHHHHHHCCCCCEEEEHHHHHHHH
NYLEISGFKVLYIENKNNVSTVDYLSEFIKNKYQKINLIDPHDFLIMKRINNFVESNNLT
HHEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCE
LNILPSPMFMSSEDLKNLFVSNAKKPLMGRFYENQRKSQKILVNSDDTPEGGKWSFDEMN
EEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHH
RKKLPKKINIPDTPKLQKNKFVVNAERSLANFDIEFIGESNNFLYPTNFEEADEWLNDFF
HHHCCCCCCCCCCCCCCCCEEEEEECCCHHCCCEEEEECCCCEECCCCHHHHHHHHHHHH
KHKFFLFGDYEDAISKENSFLWHSLLSPLLNSGLLTPDVVVNKALLFAKNNNVPINSLEG
HCEEEEEECHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHCCEEEEEECCCCCHHHHHH
FIRQIIGWREFICLVYKKYGTKMRNSNFWNFEDKPIPKSFYQGNTGIEPVDVVIKNIIKF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
GYCHHIERLMIVGNFMLLCRIHPNQVYKWFMEMFIDSYDWVMVPNVYGMSQFSDGGIFST
HHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEC
KPYISSSNYVKKMSNFKSGLWCEIWDGLFWKFIKDNESFFRKQYRLAMLTRNLDKMSAEK
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHH
LNNHLKKADKFLRDIQ
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQVSIIFPNQLFRESPILKINCEVLILEDSLFFGNDKFHKLINHKNKLVFHRASMLAYK
CCEEEEECCHHHHHCCCEEEEEEEEEEEECCEEECCHHHHHHHCCCCCEEEEHHHHHHHH
NYLEISGFKVLYIENKNNVSTVDYLSEFIKNKYQKINLIDPHDFLIMKRINNFVESNNLT
HHEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCE
LNILPSPMFMSSEDLKNLFVSNAKKPLMGRFYENQRKSQKILVNSDDTPEGGKWSFDEMN
EEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHH
RKKLPKKINIPDTPKLQKNKFVVNAERSLANFDIEFIGESNNFLYPTNFEEADEWLNDFF
HHHCCCCCCCCCCCCCCCCEEEEEECCCHHCCCEEEEECCCCEECCCCHHHHHHHHHHHH
KHKFFLFGDYEDAISKENSFLWHSLLSPLLNSGLLTPDVVVNKALLFAKNNNVPINSLEG
HCEEEEEECHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHCCEEEEEECCCCCHHHHHH
FIRQIIGWREFICLVYKKYGTKMRNSNFWNFEDKPIPKSFYQGNTGIEPVDVVIKNIIKF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
GYCHHIERLMIVGNFMLLCRIHPNQVYKWFMEMFIDSYDWVMVPNVYGMSQFSDGGIFST
HHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEC
KPYISSSNYVKKMSNFKSGLWCEIWDGLFWKFIKDNESFFRKQYRLAMLTRNLDKMSAEK
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHH
LNNHLKKADKFLRDIQ
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA