Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968012

Identifier: 123968012

GI number: 123968012

Start: 413320

End: 413712

Strand: Direct

Name: 123968012

Synonym: A9601_04751

Alternate gene names: NA

Gene position: 413320-413712 (Clockwise)

Preceding gene: 123968011

Following gene: 123968013

Centisome position: 24.75

GC content: 28.75

Gene sequence:

>393_bases
ATGAAAAATAAATTAACATTTTTATTCGATGGTGGTTGTCCACTTTGTTTGAGAGAAACAAATTTTCTTAAAAAAAGAGA
TACCTTAAATAAAATTGTATTTATAGATATTAATAGTAAGGATTATGATCAAAGACTTTTTAATGACATCTCATATTCAG
AAGCCATGTCAAACCTGCATGGGATTATTGAAAATGGTGAAACTATTAAGGGACTAGATGTACTTGCATATTCTTATGAA
TTAGTTGGTTTAGGTTGGGTTTATTATCCTTTGAAGATTAAGCTCTTATCTCCATTATTGAGATTGGTTTACAGATATTG
GGCAAAATATAGACTTCAAATTACAGGTAGATCCGATATTGAAAAACTTTGTACCTCACAATGTGAACAATAA

Upstream 100 bases:

>100_bases
ATTAGAACTGGCAATTATTAAGGCTTTATAAAGTTTGTAGTCTAAAAAAAAATTTTTATTCCACAAAAAAGTTATTTAAT
TTCTATATTTGAATAAAAAT

Downstream 100 bases:

>100_bases
ATATGGAAAGTATCGACATAGACAGAATAATAGAAATGTGTTGGGAAGATAGAACACCCTTTGAAGCTATCGAGTATCAA
TTTGGTTTAAAAGAGGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKNKLTFLFDGGCPLCLRETNFLKKRDTLNKIVFIDINSKDYDQRLFNDISYSEAMSNLHGIIENGETIKGLDVLAYSYE
LVGLGWVYYPLKIKLLSPLLRLVYRYWAKYRLQITGRSDIEKLCTSQCEQ

Sequences:

>Translated_130_residues
MKNKLTFLFDGGCPLCLRETNFLKKRDTLNKIVFIDINSKDYDQRLFNDISYSEAMSNLHGIIENGETIKGLDVLAYSYE
LVGLGWVYYPLKIKLLSPLLRLVYRYWAKYRLQITGRSDIEKLCTSQCEQ
>Mature_130_residues
MKNKLTFLFDGGCPLCLRETNFLKKRDTLNKIVFIDINSKDYDQRLFNDISYSEAMSNLHGIIENGETIKGLDVLAYSYE
LVGLGWVYYPLKIKLLSPLLRLVYRYWAKYRLQITGRSDIEKLCTSQCEQ

Specific function: Unknown

COG id: COG3011

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15201; Mature: 15201

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKLTFLFDGGCPLCLRETNFLKKRDTLNKIVFIDINSKDYDQRLFNDISYSEAMSNLH
CCCCEEEEECCCCCEEECCCHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCHHHHHHHHH
GIIENGETIKGLDVLAYSYELVGLGWVYYPLKIKLLSPLLRLVYRYWAKYRLQITGRSDI
HHHCCCCEECHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHH
EKLCTSQCEQ
HHHHHHHCCC
>Mature Secondary Structure
MKNKLTFLFDGGCPLCLRETNFLKKRDTLNKIVFIDINSKDYDQRLFNDISYSEAMSNLH
CCCCEEEEECCCCCEEECCCHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCHHHHHHHHH
GIIENGETIKGLDVLAYSYELVGLGWVYYPLKIKLLSPLLRLVYRYWAKYRLQITGRSDI
HHHCCCCEECHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHH
EKLCTSQCEQ
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA