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The map label for this gene is dppC [H]

Identifier: 123968009

GI number: 123968009

Start: 411415

End: 412170

Strand: Direct

Name: dppC [H]

Synonym: A9601_04721

Alternate gene names: 123968009

Gene position: 411415-412170 (Clockwise)

Preceding gene: 123968008

Following gene: 123968011

Centisome position: 24.64

GC content: 34.52

Gene sequence:

>756_bases
ATGAAATTTTTAGAGGCCAATAATTTTTTTGGCTATTCATTTTCAACGTTAAGCAATGATATCTTTGCCCCTCCTTCTCT
TAATCATTTTTGTGGTACAGATAGATTAGGAAGAGATGTTTGCTTAAGAACTTTGCAAGGATCATCATTAGCGATAGAAG
TTGTATTCTTAGCTATTCTTTTTTCATTAATTTTGGGTTTGCCATTGGGATTATTAAGTGGATATTTTGGTGGTTTTTTT
GATAAATGCTTATCACTAATAATGGATACCATTTTTTCAATACCTGTAATTTTGCTTTCAGTTGTTGTGGCTTTTGTATT
GGGTAAGGGTATCCTTAACGCTGCTTTGGCATTGTGTATTGTTTACTCTCCTCAATATTTTAGATTAATCAGAAATCAGA
CAATATTGGTTAAATCCGAAACTTATGTGGAGGCCGCTCAAGTTGCAGGAGCTGATGTTAAAAAAATTATTTTTAAATAT
ATTCTTCCAAATGTAATAACACCATTGCCTATTCTGCTTACCCTAAATGCTGCAGATGCAGTTTTGGTATTAGGAAGTTT
AGGATTTTTAGGCCTTGGCGTTCCTGCAGATGTCCCAGAGTGGGGAAGTGATTTAAATCTGGCTCTTGCCGCTTTACCTA
CAGGTATATGGTGGACGGCTTTGTTCCCAGGTTTGGCAATGTTTTTTTTAGTTTTAGGTCTTTCTTTTATAGGAGAGGAC
CTTGAAGAAATTTTTGATAGTCAAAATTCTGTATAA

Upstream 100 bases:

>100_bases
AAAAAAGATTTTGAATATTAACTCATTTAATCGTGTCGGCGCAAATATCAGAAAAGCTGGGTTTTTAATTGTACTTTTTT
ATCTTCTTGTTGTTTTAATA

Downstream 100 bases:

>100_bases
ATTTAGTTATCTGTAATAGGATCAAGTTCTCCTTGATCATTCAACTTTGGATATTCTATAGCTGATTTTTTATACACCTC
AGCTAATTCTGGGTAACACC

Product: putative ABC transporter, oligopeptides

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKFLEANNFFGYSFSTLSNDIFAPPSLNHFCGTDRLGRDVCLRTLQGSSLAIEVVFLAILFSLILGLPLGLLSGYFGGFF
DKCLSLIMDTIFSIPVILLSVVVAFVLGKGILNAALALCIVYSPQYFRLIRNQTILVKSETYVEAAQVAGADVKKIIFKY
ILPNVITPLPILLTLNAADAVLVLGSLGFLGLGVPADVPEWGSDLNLALAALPTGIWWTALFPGLAMFFLVLGLSFIGED
LEEIFDSQNSV

Sequences:

>Translated_251_residues
MKFLEANNFFGYSFSTLSNDIFAPPSLNHFCGTDRLGRDVCLRTLQGSSLAIEVVFLAILFSLILGLPLGLLSGYFGGFF
DKCLSLIMDTIFSIPVILLSVVVAFVLGKGILNAALALCIVYSPQYFRLIRNQTILVKSETYVEAAQVAGADVKKIIFKY
ILPNVITPLPILLTLNAADAVLVLGSLGFLGLGVPADVPEWGSDLNLALAALPTGIWWTALFPGLAMFFLVLGLSFIGED
LEEIFDSQNSV
>Mature_251_residues
MKFLEANNFFGYSFSTLSNDIFAPPSLNHFCGTDRLGRDVCLRTLQGSSLAIEVVFLAILFSLILGLPLGLLSGYFGGFF
DKCLSLIMDTIFSIPVILLSVVVAFVLGKGILNAALALCIVYSPQYFRLIRNQTILVKSETYVEAAQVAGADVKKIIFKY
ILPNVITPLPILLTLNAADAVLVLGSLGFLGLGVPADVPEWGSDLNLALAALPTGIWWTALFPGLAMFFLVLGLSFIGED
LEEIFDSQNSV

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=244, Percent_Identity=35.2459016393443, Blast_Score=158, Evalue=3e-40,
Organism=Escherichia coli, GI1787760, Length=229, Percent_Identity=36.2445414847162, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1789964, Length=240, Percent_Identity=37.0833333333333, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI1789889, Length=228, Percent_Identity=30.2631578947368, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787549, Length=237, Percent_Identity=31.2236286919831, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1787498, Length=221, Percent_Identity=28.9592760180996, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1788505, Length=237, Percent_Identity=28.6919831223629, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27121; Mature: 27121

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLEANNFFGYSFSTLSNDIFAPPSLNHFCGTDRLGRDVCLRTLQGSSLAIEVVFLAIL
CCCCCCCCCCCCCHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
FSLILGLPLGLLSGYFGGFFDKCLSLIMDTIFSIPVILLSVVVAFVLGKGILNAALALCI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYSPQYFRLIRNQTILVKSETYVEAAQVAGADVKKIIFKYILPNVITPLPILLTLNAADA
HCCHHHHHHHCCCEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHEEEECHHHH
VLVLGSLGFLGLGVPADVPEWGSDLNLALAALPTGIWWTALFPGLAMFFLVLGLSFIGED
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEIFDSQNSV
HHHHHCCCCCC
>Mature Secondary Structure
MKFLEANNFFGYSFSTLSNDIFAPPSLNHFCGTDRLGRDVCLRTLQGSSLAIEVVFLAIL
CCCCCCCCCCCCCHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
FSLILGLPLGLLSGYFGGFFDKCLSLIMDTIFSIPVILLSVVVAFVLGKGILNAALALCI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYSPQYFRLIRNQTILVKSETYVEAAQVAGADVKKIIFKYILPNVITPLPILLTLNAADA
HCCHHHHHHHCCCEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHEEEECHHHH
VLVLGSLGFLGLGVPADVPEWGSDLNLALAALPTGIWWTALFPGLAMFFLVLGLSFIGED
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEIFDSQNSV
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]