Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123967952

Identifier: 123967952

GI number: 123967952

Start: 359740

End: 359934

Strand: Direct

Name: 123967952

Synonym: A9601_04151

Alternate gene names: NA

Gene position: 359740-359934 (Clockwise)

Preceding gene: 123967951

Following gene: 123967954

Centisome position: 21.54

GC content: 26.67

Gene sequence:

>195_bases
GTGAGTATGAATAAGCACAATAATAAAGCATTATCAATCTGCAAATATGTATTGGATTCTATGATTTATAGACAAAAGTT
ACTTGGGGAAGAAGAAAATTTAAAAAATAAATTAGCATTAATAGAGGAGTATAGAGAATGGATAACTGAGGGGATTTTTG
AAAGTAATTCCCTTTATCTAATTGATAAAAGATAA

Upstream 100 bases:

>100_bases
GATTCTTTTTAAAGGAGTAAATTTTTATCTTAATAAGGATATTTTGTTACATCAATAAAGTTTTAATTAATTTAAGATTT
TAAAAATTTTTCATTTATGA

Downstream 100 bases:

>100_bases
TTAATATTTAAAAATCAAATCATTAATAATCCTAAATCTCAATTAATTAAAACTTTAGAATTATCAATTAATTATTCTCT
ATAAAGAAAAAATAATTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MSMNKHNNKALSICKYVLDSMIYRQKLLGEEENLKNKLALIEEYREWITEGIFESNSLYLIDKR

Sequences:

>Translated_64_residues
MSMNKHNNKALSICKYVLDSMIYRQKLLGEEENLKNKLALIEEYREWITEGIFESNSLYLIDKR
>Mature_63_residues
SMNKHNNKALSICKYVLDSMIYRQKLLGEEENLKNKLALIEEYREWITEGIFESNSLYLIDKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7669; Mature: 7538

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMNKHNNKALSICKYVLDSMIYRQKLLGEEENLKNKLALIEEYREWITEGIFESNSLYL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE
IDKR
EECC
>Mature Secondary Structure 
SMNKHNNKALSICKYVLDSMIYRQKLLGEEENLKNKLALIEEYREWITEGIFESNSLYL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE
IDKR
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA