| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967920
Identifier: 123967920
GI number: 123967920
Start: 342351
End: 342695
Strand: Reverse
Name: 123967920
Synonym: A9601_03831
Alternate gene names: NA
Gene position: 342695-342351 (Counterclockwise)
Preceding gene: 123967921
Following gene: 123967917
Centisome position: 20.52
GC content: 31.01
Gene sequence:
>345_bases ATGTCTTATCCCTCAAGAGACGAAATACTTGCATCTTCAAAAGGGTGGGTAGCTTCTTTTTTAAATTTTCTTCCTGGTTT AGGATCGGGTTACTTATATCAAAGAAGATGGAAACCCTATTTTTTTACAATCATTGCTAGTACTATATGGTTCGCTTTAG GTATTTTATTACAAGGAGATTCTGAACCTTCTCAAAATGAACAAATAATTGGAATTTCTGGTCTTTTTTTAATATCAATA GTGACAGTTATAGAAGCCAACTTGGCTTTCAAAAAAGCAAGTAATAAAACAAAAGCTGAAAAAGAGAAAAAAATATCCTC TGACAAAAAAGGATGGTTTAAATAA
Upstream 100 bases:
>100_bases ATAAAGAAAAAATAAGAATGTTCTTACCCTTTAGTTGGGTCATTTGCGCAGCAATTTCTTTCGCTTATATAAATTCACAT TTAATCAATACCTAACATAA
Downstream 100 bases:
>100_bases TTCAAAAAATTAGATCTAAGAAAATATTTAATTAGTTCTCAGTTTTTTAATTTAAGTAAAAATTGCGATATGTATTTTAT TTTATAAAAAATTTTTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSYPSRDEILASSKGWVASFLNFLPGLGSGYLYQRRWKPYFFTIIASTIWFALGILLQGDSEPSQNEQIIGISGLFLISI VTVIEANLAFKKASNKTKAEKEKKISSDKKGWFK
Sequences:
>Translated_114_residues MSYPSRDEILASSKGWVASFLNFLPGLGSGYLYQRRWKPYFFTIIASTIWFALGILLQGDSEPSQNEQIIGISGLFLISI VTVIEANLAFKKASNKTKAEKEKKISSDKKGWFK >Mature_113_residues SYPSRDEILASSKGWVASFLNFLPGLGSGYLYQRRWKPYFFTIIASTIWFALGILLQGDSEPSQNEQIIGISGLFLISIV TVIEANLAFKKASNKTKAEKEKKISSDKKGWFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12814; Mature: 12683
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYPSRDEILASSKGWVASFLNFLPGLGSGYLYQRRWKPYFFTIIASTIWFALGILLQGD CCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCC SEPSQNEQIIGISGLFLISIVTVIEANLAFKKASNKTKAEKEKKISSDKKGWFK CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SYPSRDEILASSKGWVASFLNFLPGLGSGYLYQRRWKPYFFTIIASTIWFALGILLQGD CCCCCHHHHCCCCCHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCC SEPSQNEQIIGISGLFLISIVTVIEANLAFKKASNKTKAEKEKKISSDKKGWFK CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA