Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123967913

Identifier: 123967913

GI number: 123967913

Start: 339854

End: 340246

Strand: Reverse

Name: 123967913

Synonym: A9601_03761

Alternate gene names: NA

Gene position: 340246-339854 (Counterclockwise)

Preceding gene: 123967914

Following gene: 123967911

Centisome position: 20.38

GC content: 32.82

Gene sequence:

>393_bases
TTGGATAGGCCCATAACCCCCATAGACGAATTTGAAAGAGCACTAGATAAAGCAGCTCTTACTAAAGAAGAATATGAATT
GATAGACTATATACGCTATACAAGTGTTTTTACACAACCTAGCCTTATTAAAGATTTAAAAAGGCCATCAAAACCTCCTC
TTTTGTCAGTTCTATGTCAAATTTGCAGAAAAATTGGTTCAGAGATGCCAGATCATTTCAAAAAAGTAATTGAGTGGTCA
ATTGAAATAAGTGATCACAATACAAAATGGGATGCTCATTTAATTTGCGCAGAAGCATTGAATATAGACAAAATTCCATT
AAGTCCTATTCATGGAACAACTTTATTTGATGTTCTTGTTGTGCACAAAGAATTATTTCTTGGATTCGATTAA

Upstream 100 bases:

>100_bases
GAACAAGATAAAGATGAATCTCCTATATCTATAGAAAGCAATCAAACCAATGAAATTAATCAAGAAAAAATAGATTCAGA
AAACAGCAAAAAATAATATC

Downstream 100 bases:

>100_bases
ATTAATCATCTAAAGGCACAGAATCAGTATCTATAACTTCCGAATCATCATAATTATTTATTTTATTTTCAATCCAGTTA
TTTATATAACTAACTAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MDRPITPIDEFERALDKAALTKEEYELIDYIRYTSVFTQPSLIKDLKRPSKPPLLSVLCQICRKIGSEMPDHFKKVIEWS
IEISDHNTKWDAHLICAEALNIDKIPLSPIHGTTLFDVLVVHKELFLGFD

Sequences:

>Translated_130_residues
MDRPITPIDEFERALDKAALTKEEYELIDYIRYTSVFTQPSLIKDLKRPSKPPLLSVLCQICRKIGSEMPDHFKKVIEWS
IEISDHNTKWDAHLICAEALNIDKIPLSPIHGTTLFDVLVVHKELFLGFD
>Mature_130_residues
MDRPITPIDEFERALDKAALTKEEYELIDYIRYTSVFTQPSLIKDLKRPSKPPLLSVLCQICRKIGSEMPDHFKKVIEWS
IEISDHNTKWDAHLICAEALNIDKIPLSPIHGTTLFDVLVVHKELFLGFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15006; Mature: 15006

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRPITPIDEFERALDKAALTKEEYELIDYIRYTSVFTQPSLIKDLKRPSKPPLLSVLCQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHH
ICRKIGSEMPDHFKKVIEWSIEISDHNTKWDAHLICAEALNIDKIPLSPIHGTTLFDVLV
HHHHHHCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
VHKELFLGFD
HHHHHHHCCC
>Mature Secondary Structure
MDRPITPIDEFERALDKAALTKEEYELIDYIRYTSVFTQPSLIKDLKRPSKPPLLSVLCQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHH
ICRKIGSEMPDHFKKVIEWSIEISDHNTKWDAHLICAEALNIDKIPLSPIHGTTLFDVLV
HHHHHHCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
VHKELFLGFD
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA