| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is psaE
Identifier: 123967892
GI number: 123967892
Start: 329006
End: 329215
Strand: Reverse
Name: psaE
Synonym: A9601_03551
Alternate gene names: 123967892
Gene position: 329215-329006 (Counterclockwise)
Preceding gene: 123967893
Following gene: 123967891
Centisome position: 19.71
GC content: 34.76
Gene sequence:
>210_bases ATGGCTATTTCAAGAGGAGATCTCGTAAGAGTAAAAAGACCAGAGTCATATTGGTACAATGAAATAGGTAAAGTTGCTTC AGTTGATACCTCAGGTATTAAATATAACTGTGTAGTCAGATTCGATAAAGTAAATTACGCTGGGATTAGCGGAACTGATG GTGGAGCAAATACAAATAATTTCGCTGAAAGTGAATTAGAAAAAGCTTAA
Upstream 100 bases:
>100_bases TAATAAATGATTTTTGTTAAAACTTTTAATTAATATGTGTGAATAATTTGTCTAAGAATATTAATGATGGGTTATTCTAC AAAAAGTTAAATTAATTGTA
Downstream 100 bases:
>100_bases ATAATTGCCTGAATTACCTGAAGTAGAAACAGTTCGAAGAGGTTTAGAGCAAAAACTTAATAACTTTATTATTAAAAAAG TAGAAATCTGTAGGTATTCA
Product: photosystem I reaction center subunit IV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MAISRGDLVRVKRPESYWYNEIGKVASVDTSGIKYNCVVRFDKVNYAGISGTDGGANTNNFAESELEKA
Sequences:
>Translated_69_residues MAISRGDLVRVKRPESYWYNEIGKVASVDTSGIKYNCVVRFDKVNYAGISGTDGGANTNNFAESELEKA >Mature_68_residues AISRGDLVRVKRPESYWYNEIGKVASVDTSGIKYNCVVRFDKVNYAGISGTDGGANTNNFAESELEKA
Specific function: Stabilizes the interaction between psaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Peripheral membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psaE family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSAE_PROM0 (A3PB54)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001090580.1 - ProteinModelPortal: A3PB54 - SMR: A3PB54 - STRING: A3PB54 - GeneID: 4912191 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_03561 - eggNOG: NOG08807 - HOGENOM: HBG599647 - OMA: GINTNNF - ProtClustDB: PRK02749 - BioCyc: PMAR167546:P9301ORF_0365-MONOMER - GO: GO:0009536 - GO: GO:0015979 - HAMAP: MF_00613 - InterPro: IPR008990 - InterPro: IPR003375 - ProDom: PD004772
Pfam domain/function: PF02427 PSI_PsaE; SSF50090 E_transp_acc
EC number: NA
Molecular weight: Translated: 7563; Mature: 7432
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISRGDLVRVKRPESYWYNEIGKVASVDTSGIKYNCVVRFDKVNYAGISGTDGGANTNN CCCCCCCEEEEECCCCCCHHCCCCEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC FAESELEKA CCCCHHCCC >Mature Secondary Structure AISRGDLVRVKRPESYWYNEIGKVASVDTSGIKYNCVVRFDKVNYAGISGTDGGANTNN CCCCCCEEEEECCCCCCHHCCCCEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC FAESELEKA CCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA