| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967888
Identifier: 123967888
GI number: 123967888
Start: 320956
End: 322395
Strand: Reverse
Name: 123967888
Synonym: A9601_03511
Alternate gene names: NA
Gene position: 322395-320956 (Counterclockwise)
Preceding gene: 123967889
Following gene: 123967885
Centisome position: 19.31
GC content: 35.76
Gene sequence:
>1440_bases ATGGCAGAAAGATTTAGTCAAAAAAATTTAAGAGTAAGACCAAGTTCTGATGAGGAAAAAATTGTAACAAATGCAAAAAA ACACTTCGAGAAGACTTTGGTTGAGATATCAGGCGAGTTAGTGGGAAGCGTCGCTGCACTAGAACATCCAACAAAAAATA AAAAATTAAATTATGGAGAAATATTTTTAAGAGACAATGTTCCTGTAATGATTTATCTCATTACCCAAAAACGTTACGAA ATTGTCAAAAAGTTCCTAAGTGTATGCCTTGAGTTACAAAGCTCTAACTACCAAACACGTGGCGTATTTCCTACTAGTTT CGTTGAAGAAAATGGACAGCTCATTGGAGACTATGGTCAGAGATCAATAGGGAGGATTACTTCAGCTGATGCAAGTTTAT GGTGGCCCATTTTATGTTGGTATTATGTCAATAAAAGCGGTGATTATGCCTTTGGAAAAAGTCAAAGCGTTCAAAGAGGT ATTCAACTTCTACTAGATCTAGTTCTACATCCAACATTTGAGGGTACTCCAGTACTTTTTGTGCCAGATTGCGCATTTAT GATTGATAGACCTATGGATGTATGGGGAGCACCACTAGAAGTTGAAGTTTTACTTCATGGATGTTTAAAAAGTTGCATTA ACTTAATGGAATTAAGTAGAGCAGATCATGTTAGTAGACTTTTAGATCAAAGACTTATTCTTACAAATCAATGGGTTAAG GATTTAGGAAGTTTTCTTTTAAAGCATTATTGGGTTACAAGCCAAACAATGCAAATTTTAAGAAGAAGGCCAACTGAGCA GTATGGTGATGATCAGCACTTCAATGAATTTAATGTTCAACCTCAAGTGGTTCCCTCATGGCTACAAGATTGGTTAGAGA ATAGAGGCGGTTACTTAATAGGAAATATTAGGACAGGAAGGCCTGACTTTCGATTTTACAGTTTAGGCAATTCTTTAGCA TGTATGTTCGGAGTTCTTCCTCCTGAAGAACAAAGAGCTTTATTTAGATTAGTTTTACATAACAGACAGCATTTGATGGC TCAAATGCCTATGAGAATTTGTCATCCTCATATGGATGTAGAGGAATGGCAAAATAAAACTGGATCCGATCCAAAGAATT GGCCTTGGAGTTACCATAACGGTGGTCATTGGCCAAGCTTACTTTGGTTTTTTGGTACAGCTGTCCTATTACATCAAAAA CATTATGGTTCAGACGATGTGATCCTCATGGAAGAAATGAAATCTTTAATAGAGGAATCATATTGGTGTCAACTTAATCA ATTGCCTAAGCAAGAATGGGCAGAATATTTTGATGGTCCTACAGGAACTTGGGTTGGACAACAATCAAGAACATATCAGA CTTGGACAATTGTTGGATTTTTATTAATGAATCACTTTCTAAGGAATGAGTATAACGATTTAGATATGTTTAAGATTTGA
Upstream 100 bases:
>100_bases CTGTAATTGTGCAACCTTTTATACAAAAATTTTTTATTAATTTTTTATTTGATCAAAGTCTCATTAAACAACTAGGCTTA AATAAAGGGATATAAATGAA
Downstream 100 bases:
>100_bases GTTTAAAATAGTCCTAAGGTTAGTGATTTATCAATTGGCAAGCATGCCCCAATACCAAGGTATATTGTTAGAAAAGTTCC GAATAAGAAAACAGACATTG
Product: putative neutral invertase-like protein
Products: NA
Alternate protein names: Neutral Invertase-Like Protein; Neutral Invertase Like Protein; Plant Neutral Invertase Superfamily; LIM17 Protein
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MAERFSQKNLRVRPSSDEEKIVTNAKKHFEKTLVEISGELVGSVAALEHPTKNKKLNYGEIFLRDNVPVMIYLITQKRYE IVKKFLSVCLELQSSNYQTRGVFPTSFVEENGQLIGDYGQRSIGRITSADASLWWPILCWYYVNKSGDYAFGKSQSVQRG IQLLLDLVLHPTFEGTPVLFVPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSRADHVSRLLDQRLILTNQWVK DLGSFLLKHYWVTSQTMQILRRRPTEQYGDDQHFNEFNVQPQVVPSWLQDWLENRGGYLIGNIRTGRPDFRFYSLGNSLA CMFGVLPPEEQRALFRLVLHNRQHLMAQMPMRICHPHMDVEEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGTAVLLHQK HYGSDDVILMEEMKSLIEESYWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMNHFLRNEYNDLDMFKI
Sequences:
>Translated_479_residues MAERFSQKNLRVRPSSDEEKIVTNAKKHFEKTLVEISGELVGSVAALEHPTKNKKLNYGEIFLRDNVPVMIYLITQKRYE IVKKFLSVCLELQSSNYQTRGVFPTSFVEENGQLIGDYGQRSIGRITSADASLWWPILCWYYVNKSGDYAFGKSQSVQRG IQLLLDLVLHPTFEGTPVLFVPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSRADHVSRLLDQRLILTNQWVK DLGSFLLKHYWVTSQTMQILRRRPTEQYGDDQHFNEFNVQPQVVPSWLQDWLENRGGYLIGNIRTGRPDFRFYSLGNSLA CMFGVLPPEEQRALFRLVLHNRQHLMAQMPMRICHPHMDVEEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGTAVLLHQK HYGSDDVILMEEMKSLIEESYWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMNHFLRNEYNDLDMFKI >Mature_478_residues AERFSQKNLRVRPSSDEEKIVTNAKKHFEKTLVEISGELVGSVAALEHPTKNKKLNYGEIFLRDNVPVMIYLITQKRYEI VKKFLSVCLELQSSNYQTRGVFPTSFVEENGQLIGDYGQRSIGRITSADASLWWPILCWYYVNKSGDYAFGKSQSVQRGI QLLLDLVLHPTFEGTPVLFVPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSRADHVSRLLDQRLILTNQWVKD LGSFLLKHYWVTSQTMQILRRRPTEQYGDDQHFNEFNVQPQVVPSWLQDWLENRGGYLIGNIRTGRPDFRFYSLGNSLAC MFGVLPPEEQRALFRLVLHNRQHLMAQMPMRICHPHMDVEEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGTAVLLHQKH YGSDDVILMEEMKSLIEESYWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMNHFLRNEYNDLDMFKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55925; Mature: 55794
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERFSQKNLRVRPSSDEEKIVTNAKKHFEKTLVEISGELVGSVAALEHPTKNKKLNYGE CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE IFLRDNVPVMIYLITQKRYEIVKKFLSVCLELQSSNYQTRGVFPTSFVEENGQLIGDYGQ EEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHCCCCEEECCCC RSIGRITSADASLWWPILCWYYVNKSGDYAFGKSQSVQRGIQLLLDLVLHPTFEGTPVLF HHHCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE VPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSRADHVSRLLDQRLILTNQWVK ECCHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLGSFLLKHYWVTSQTMQILRRRPTEQYGDDQHFNEFNVQPQVVPSWLQDWLENRGGYLI HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE GNIRTGRPDFRFYSLGNSLACMFGVLPPEEQRALFRLVLHNRQHLMAQMPMRICHPHMDV EEEECCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCH EEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGTAVLLHQKHYGSDDVILMEEMKSLIEES HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHH YWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMNHFLRNEYNDLDMFKI HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AERFSQKNLRVRPSSDEEKIVTNAKKHFEKTLVEISGELVGSVAALEHPTKNKKLNYGE CCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE IFLRDNVPVMIYLITQKRYEIVKKFLSVCLELQSSNYQTRGVFPTSFVEENGQLIGDYGQ EEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHCCCCEEECCCC RSIGRITSADASLWWPILCWYYVNKSGDYAFGKSQSVQRGIQLLLDLVLHPTFEGTPVLF HHHCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE VPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSRADHVSRLLDQRLILTNQWVK ECCHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLGSFLLKHYWVTSQTMQILRRRPTEQYGDDQHFNEFNVQPQVVPSWLQDWLENRGGYLI HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE GNIRTGRPDFRFYSLGNSLACMFGVLPPEEQRALFRLVLHNRQHLMAQMPMRICHPHMDV EEEECCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCH EEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGTAVLLHQKHYGSDDVILMEEMKSLIEES HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHH YWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMNHFLRNEYNDLDMFKI HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA