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The map label for this gene is sua5 [H]

Identifier: 123967880

GI number: 123967880

Start: 314306

End: 314887

Strand: Direct

Name: sua5 [H]

Synonym: A9601_03431

Alternate gene names: 123967880

Gene position: 314306-314887 (Clockwise)

Preceding gene: 123967879

Following gene: 123967886

Centisome position: 18.82

GC content: 36.08

Gene sequence:

>582_bases
ATGGATTTAGTAGACTGCAAATCCGCTTTGAAGACTCTTAAAAGTGGTTTACCTATAATCTTCCCAACTGACACATTACC
TGCGATTGGATGCTTGCCAAAATTTTCAAATATTATTTACGAGTTTAAAAAAAGGGATAGAGGCAAACCCTTAATTCTTA
TGGGGTCAGAACACAAACAATTAATTGATTATGTTCACGAATCAGCTAAAGAAGATTACGAAAATATAGCTTCAAAATAT
TGGCCTGGAGCTCTGACAATGGTTGTTCCTGCGTCAGAGAAGCAGACTACAATCCTTACAAGCAATGATCTTACCCTTGG
GTTGAGGATTCCAAATTCATATATGGCTAAATCTCTCATGAGAGAAACAGGACCATTGTTAACTTCAAGTGCAAATATTT
CAGGTTTTAAAGGATCTATTACAGTCGAAGGTATTGCTCTAGACTTCCCTTCTGTAAAAATTTTGGGTCCTATCCCATGG
GAAAAAAGAAGTGGAAAAGCAAGTACTATAATATTTTGGAAGAAAAGTGGAGATTGGAGACTGATTAGAGAAGGAGAAGT
ATTAGTAAGGGAATTGCATTAA

Upstream 100 bases:

>100_bases
AAAATAAATTTACATCAATAGAAATTGTGAAAGATCTTTCAGGTATTGGTAGGTTTACCATTGGAAGATATAAATAAATT
ATTTCAAGTTCATAATCTAA

Downstream 100 bases:

>100_bases
TGTTTTTATTATTATTTTTTGTTTTATTGATTCAATTTTTTACTTATTGGATATTTGAACCCCTTGTATCTTTTTTAGAG
TATGTTCTCGAAATAAGATT

Product: putative translation factor (SUA5)

Products: NA

Alternate protein names: t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN [H]

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MDLVDCKSALKTLKSGLPIIFPTDTLPAIGCLPKFSNIIYEFKKRDRGKPLILMGSEHKQLIDYVHESAKEDYENIASKY
WPGALTMVVPASEKQTTILTSNDLTLGLRIPNSYMAKSLMRETGPLLTSSANISGFKGSITVEGIALDFPSVKILGPIPW
EKRSGKASTIIFWKKSGDWRLIREGEVLVRELH

Sequences:

>Translated_193_residues
MDLVDCKSALKTLKSGLPIIFPTDTLPAIGCLPKFSNIIYEFKKRDRGKPLILMGSEHKQLIDYVHESAKEDYENIASKY
WPGALTMVVPASEKQTTILTSNDLTLGLRIPNSYMAKSLMRETGPLLTSSANISGFKGSITVEGIALDFPSVKILGPIPW
EKRSGKASTIIFWKKSGDWRLIREGEVLVRELH
>Mature_193_residues
MDLVDCKSALKTLKSGLPIIFPTDTLPAIGCLPKFSNIIYEFKKRDRGKPLILMGSEHKQLIDYVHESAKEDYENIASKY
WPGALTMVVPASEKQTTILTSNDLTLGLRIPNSYMAKSLMRETGPLLTSSANISGFKGSITVEGIALDFPSVKILGPIPW
EKRSGKASTIIFWKKSGDWRLIREGEVLVRELH

Specific function: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine [H]

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

Organism=Escherichia coli, GI2367210, Length=148, Percent_Identity=30.4054054054054, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR006070 [H]

Pfam domain/function: PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 21479; Mature: 21479

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLVDCKSALKTLKSGLPIIFPTDTLPAIGCLPKFSNIIYEFKKRDRGKPLILMGSEHKQ
CCCHHHHHHHHHHHCCCCEEEECCCCCHHHCHHHHHHHHHHHHHCCCCCCEEEECCCHHH
LIDYVHESAKEDYENIASKYWPGALTMVVPASEKQTTILTSNDLTLGLRIPNSYMAKSLM
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCEEEEEECCHHHHHHHHH
RETGPLLTSSANISGFKGSITVEGIALDFPSVKILGPIPWEKRSGKASTIIFWKKSGDWR
HHCCCCEECCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCEEEEEEEEECCCEE
LIREGEVLVRELH
EEECCCEEEEECC
>Mature Secondary Structure
MDLVDCKSALKTLKSGLPIIFPTDTLPAIGCLPKFSNIIYEFKKRDRGKPLILMGSEHKQ
CCCHHHHHHHHHHHCCCCEEEECCCCCHHHCHHHHHHHHHHHHHCCCCCCEEEECCCHHH
LIDYVHESAKEDYENIASKYWPGALTMVVPASEKQTTILTSNDLTLGLRIPNSYMAKSLM
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCEEEEEECCHHHHHHHHH
RETGPLLTSSANISGFKGSITVEGIALDFPSVKILGPIPWEKRSGKASTIIFWKKSGDWR
HHCCCCEECCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCEEEEEEEEECCCEE
LIREGEVLVRELH
EEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA