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The map label for this gene is psbM

Identifier: 123967878

GI number: 123967878

Start: 313249

End: 313401

Strand: Direct

Name: psbM

Synonym: A9601_03411

Alternate gene names: 123967878

Gene position: 313249-313401 (Clockwise)

Preceding gene: 123967877

Following gene: 123967879

Centisome position: 18.76

GC content: 37.91

Gene sequence:

>153_bases
ATGGAAACAACTAACTTTGGATTCGTAGCTAGTCTTTTATTTGTAGGGGTGCCAACTATATTCCTCATTGGTTTATTTAT
CTCTACTCAAGATGGAGAAAAGTCAAGCTTCTACTCTGACTCTAGTAAAGGTAGACTTGGACCAAAACGCTGA

Upstream 100 bases:

>100_bases
TTAAGACTGTTAATCAGTTTATAAAATTTGTTTATTTTTCCACTTTATTTCTAGTTATATGTCTATAGTCTTAATACCTA
ATTATAGAACTACCAACTAA

Downstream 100 bases:

>100_bases
TGCTTTAATAAATGCTTTGCATTTCTGTAAAGGAATTTTTATTGTGGAAAAAAAAGCAACTTTCAAAAGGTGGTGATCAA
CAATCTTTTGAAGTTTTACT

Product: photosystem II reaction center protein M

Products: NA

Alternate protein names: PSII-M

Number of amino acids: Translated: 50; Mature: 50

Protein sequence:

>50_residues
METTNFGFVASLLFVGVPTIFLIGLFISTQDGEKSSFYSDSSKGRLGPKR

Sequences:

>Translated_50_residues
METTNFGFVASLLFVGVPTIFLIGLFISTQDGEKSSFYSDSSKGRLGPKR
>Mature_50_residues
METTNFGFVASLLFVGVPTIFLIGLFISTQDGEKSSFYSDSSKGRLGPKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbM family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBM_PROM0 (A3PB40)

Other databases:

- EMBL:   CP000576
- RefSeq:   YP_001090566.1
- STRING:   A3PB40
- GeneID:   4912485
- GenomeReviews:   CP000576_GR
- KEGG:   pmg:P9301_03421
- HOGENOM:   HBG635643
- OMA:   FFSDSSK
- ProtClustDB:   PRK14094
- BioCyc:   PMAR167546:P9301ORF_0346-MONOMER
- HAMAP:   MF_00438
- InterPro:   IPR007826
- TIGRFAMs:   TIGR03038

Pfam domain/function: PF05151 PsbM

EC number: NA

Molecular weight: Translated: 5447; Mature: 5447

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1e67f808)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTNFGFVASLLFVGVPTIFLIGLFISTQDGEKSSFYSDSSKGRLGPKR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
>Mature Secondary Structure
METTNFGFVASLLFVGVPTIFLIGLFISTQDGEKSSFYSDSSKGRLGPKR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA