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The map label for this gene is nrdR [H]

Identifier: 123967874

GI number: 123967874

Start: 310341

End: 310820

Strand: Reverse

Name: nrdR [H]

Synonym: A9601_03371

Alternate gene names: 123967874

Gene position: 310820-310341 (Counterclockwise)

Preceding gene: 123967875

Following gene: 123967873

Centisome position: 18.61

GC content: 32.71

Gene sequence:

>480_bases
ATGCAGTGTCCAACCTGTCAAAACACAGATAGCAGAGTTTTGGAATCAAGATCTGCTGATAGTGGTAAAAGTGTTCGAAG
AAGAAGAGAGTGCTTAAATTGCAGCTTTAGATTCACAACTTATGAAAGAGTGGAAACAATGCCAGTTTCAGTTTTAAAGA
AAGACGGTGGCAGAGAATTATTTGATAAGCAAAAATTATTTACTGGCATATCAAGGGCATGCGAAAAGACTAACTTCAGT
AGTGAAGAAATTATTAATTTCGTAGATGGAATTGAATCACAAATCGTTCAAGACTCTAATAAAGATATTAAATCTTCACA
TATCGGGGAATTAATACTTAAAAATCTTAGAAAAGAAAACGAAGTCGCCTATATAAGATACGCCTCAGTTTACAGAAAAT
TTAACGGGGTAAAAGATTTTATTTCTACTCTTGAATCTCTAAAAGGAAGTTCAAAAAACCAATTAGCTTCAATTTCATAA

Upstream 100 bases:

>100_bases
GGAAATGAACTAAGTAAAAACCTCTTTAACAAGAGGTTTTTTACTTTTCATAATTAGAAAATTACCCTACTATTAGAGTT
AAAGTACACTTTTTCACCAC

Downstream 100 bases:

>100_bases
AATTCAGCATCTTAAAGTGTAGAATACATATCACAAATATATTTTGCTTTTAGTGTGCAGGCTAATAGCATTCCTTTCTA
ACTACCTTAGGTAGTCTGCG

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MQCPTCQNTDSRVLESRSADSGKSVRRRRECLNCSFRFTTYERVETMPVSVLKKDGGRELFDKQKLFTGISRACEKTNFS
SEEIINFVDGIESQIVQDSNKDIKSSHIGELILKNLRKENEVAYIRYASVYRKFNGVKDFISTLESLKGSSKNQLASIS

Sequences:

>Translated_159_residues
MQCPTCQNTDSRVLESRSADSGKSVRRRRECLNCSFRFTTYERVETMPVSVLKKDGGRELFDKQKLFTGISRACEKTNFS
SEEIINFVDGIESQIVQDSNKDIKSSHIGELILKNLRKENEVAYIRYASVYRKFNGVKDFISTLESLKGSSKNQLASIS
>Mature_159_residues
MQCPTCQNTDSRVLESRSADSGKSVRRRRECLNCSFRFTTYERVETMPVSVLKKDGGRELFDKQKLFTGISRACEKTNFS
SEEIINFVDGIESQIVQDSNKDIKSSHIGELILKNLRKENEVAYIRYASVYRKFNGVKDFISTLESLKGSSKNQLASIS

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=140, Percent_Identity=42.8571428571429, Blast_Score=122, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 18108; Mature: 18108

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCPTCQNTDSRVLESRSADSGKSVRRRRECLNCSFRFTTYERVETMPVSVLKKDGGREL
CCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHH
FDKQKLFTGISRACEKTNFSSEEIINFVDGIESQIVQDSNKDIKSSHIGELILKNLRKEN
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
EVAYIRYASVYRKFNGVKDFISTLESLKGSSKNQLASIS
CCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQCPTCQNTDSRVLESRSADSGKSVRRRRECLNCSFRFTTYERVETMPVSVLKKDGGREL
CCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHH
FDKQKLFTGISRACEKTNFSSEEIINFVDGIESQIVQDSNKDIKSSHIGELILKNLRKEN
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
EVAYIRYASVYRKFNGVKDFISTLESLKGSSKNQLASIS
CCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA