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The map label for this gene is cpeS [H]

Identifier: 123967867

GI number: 123967867

Start: 304241

End: 304792

Strand: Reverse

Name: cpeS [H]

Synonym: A9601_03301

Alternate gene names: 123967867

Gene position: 304792-304241 (Counterclockwise)

Preceding gene: 123967868

Following gene: 123967865

Centisome position: 18.25

GC content: 27.17

Gene sequence:

>552_bases
TTGACGAAGAATCTAACAATAATTAATCAATTCATTGATAAAAGTATAGGAGAGTGGAAATCTATTAGAAGTACGCACAC
TTTAGCTTTTCAGGAATTTGAAAACTCAACTAGTAAAATATATATAAAACATATCAACAAAAAAAATAAAAAAGTCGTTG
AAATTTTTAAAAATTATAAATTTAGTTTAAACCTAGAGAGCATAGCCATTTCTATAAACTGGCAAGCTATTAGCGATTGG
GACAATCATGATATCCGTGAGGGAGATGAAACTATTCTGATTTTTTTACCCAAAGATGAAAATTCAGGAATTGTTTTAAG
AAATAAAGGTTATACAGAATCCTTTATTTCATCATCCAATTATTTTGTTGATGAACAAAATAATTTACACATTAAAACTA
TTTATAAATCAACAGTTTCCGAAGAAAGAATTTCCTTTTTGTCCACTCATGTAAGATCCAGATTTTCTACCATTCGAAAT
CTAGAAAATAACTCAGTAATACAAACGTCACATACTTCAGAGATAAGGAATTTAACTAGTTTAAAAGATTAA

Upstream 100 bases:

>100_bases
ACTCCTTCTGGATTAAAAGTAACTTCTGCAAAGAGATTAATGGTGGATTCAATGGTAAGAATGATACAAAAAGCAGAAAA
TCATTCCGTAGAAGATAAAC

Downstream 100 bases:

>100_bases
TTATCCTTTCAAATTGAAACTCTGTTTCAGATATTAATTTAGGAAGAAAGCCTTTGTCTCCATGCATTTTTTTAACTGTT
GAATTCAAATCAGAGATAGT

Product: phycoerythrin linker protein CpeS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTKNLTIINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIYIKHINKKNKKVVEIFKNYKFSLNLESIAISINWQAISDW
DNHDIREGDETILIFLPKDENSGIVLRNKGYTESFISSSNYFVDEQNNLHIKTIYKSTVSEERISFLSTHVRSRFSTIRN
LENNSVIQTSHTSEIRNLTSLKD

Sequences:

>Translated_183_residues
MTKNLTIINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIYIKHINKKNKKVVEIFKNYKFSLNLESIAISINWQAISDW
DNHDIREGDETILIFLPKDENSGIVLRNKGYTESFISSSNYFVDEQNNLHIKTIYKSTVSEERISFLSTHVRSRFSTIRN
LENNSVIQTSHTSEIRNLTSLKD
>Mature_182_residues
TKNLTIINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIYIKHINKKNKKVVEIFKNYKFSLNLESIAISINWQAISDWD
NHDIREGDETILIFLPKDENSGIVLRNKGYTESFISSSNYFVDEQNNLHIKTIYKSTVSEERISFLSTHVRSRFSTIRNL
ENNSVIQTSHTSEIRNLTSLKD

Specific function: Acts as a chromphore lyase, covalently attaching 3Z- phycoerythrobilin (3Z-PEB) to its target protein CpeB (phycoerythrin). Binds the isomeric chromophores 3E- phycoerythrobilin (3E-PEB), 3Z-PEB as well as their precursor 15,16-dihydrobiliverdin (DHBV) bu

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcS/CpeS biliprotein lyase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR018536 [H]

Pfam domain/function: PF09367 CpeS [H]

EC number: NA

Molecular weight: Translated: 21353; Mature: 21222

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNLTIINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIYIKHINKKNKKVVEIFKNYK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCE
FSLNLESIAISINWQAISDWDNHDIREGDETILIFLPKDENSGIVLRNKGYTESFISSSN
EEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCHHHHCCCC
YFVDEQNNLHIKTIYKSTVSEERISFLSTHVRSRFSTIRNLENNSVIQTSHTSEIRNLTS
EEEECCCCEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHC
LKD
CCC
>Mature Secondary Structure 
TKNLTIINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIYIKHINKKNKKVVEIFKNYK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCE
FSLNLESIAISINWQAISDWDNHDIREGDETILIFLPKDENSGIVLRNKGYTESFISSSN
EEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCHHHHCCCC
YFVDEQNNLHIKTIYKSTVSEERISFLSTHVRSRFSTIRNLENNSVIQTSHTSEIRNLTS
EEEECCCCEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHC
LKD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]