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The map label for this gene is 123967837

Identifier: 123967837

GI number: 123967837

Start: 276082

End: 277500

Strand: Reverse

Name: 123967837

Synonym: A9601_03001

Alternate gene names: NA

Gene position: 277500-276082 (Counterclockwise)

Preceding gene: 123967840

Following gene: 123967834

Centisome position: 16.62

GC content: 27.48

Gene sequence:

>1419_bases
TTGAATTCTCTTCATTTAAAAAGTTTTACAAGATGCAAAAGAAAAGCATGGCTCGATTTTAAGGGTAAAAAATCTTATGA
AGTTTGGTCTCCCCATAAAGCTATAGATAAAATTAATCAGTTTCAAATTTTCTCTGAATTTTGTAATGGTGAAATATATT
CAGGATTAAAAGCATGTGAAAATGGTTATCAAGGGGTAATTGGATTAAAAATCAAAGGGAATCTTTTCCAAAATATAAAC
GCAGAGATACTTCCACAATTACTTTTAAAGACTAAAGGTAAAAGTAAATGGGGAGAATATAAATATTTACCTGCTGTTTA
TAAGTTAGGCCACAAAACAACTAAAGAACATTTATTCGACTTAGCTTTTTGTTCTATGCTTTTGGAATCTTTTCAAGAAT
CTAAAATTGAGAAAGGATTAGTAATTTCAACTTTTTATAAAAAAGTTAAAGTTGAAGAGATTTATTTAAATAAAAAATTA
AGAAAAAAAGTTTTAAATGTGTTATTAAATTTGAATGAATGCTTGGAGGGATCTATACCAGAAATAACTCAAGATAGAAA
AAAATGTACCATCTGTTCATGGCAAAAATTTTGTGACAAAGAAGCAAAAGAAAATGGATATCTAACAGATATAGATGGAA
TAGGGTCCAAAACGGCCTCTTTACTCAACGCAAACGGAATAACTAATACCCAAACATTAGCTTCGTGTAGCGAAAAACAA
CTTGTAGAGAAATTATCAACATTCAAAGATCAGAAGTATGAAAAAGCATCCATATTTGTAAAGCAAGCACAAGCATATAT
CTCTGGAGAACCATATTTCATTTCTAATAAAAATAATACGGAAGATTTATTAGAAAAAATATGTTCGGGATTTTATATCT
TTGATATTGAGTCAAATCCAGATGAAAAGCATGATTTTTTATATGGATTTTTAAAAGTAAATAATTTGTCTATAAAAAAA
GAAGATCTTACTTATGAACCAATCTTAAATCTTAAAAACAATGAAGGAGAATCTTACAGTCAAATTATTGAAAAACTTTT
TTCACACAAGGAATTGCCAGTTTTGCATTACGGAGAAACTGAAAAAATATCAATAATTAATATTGCTAAAGAACTAAATT
TTAGTTTTGAAGAAATTGATTCACTTACCTCAAGATTTATTGACTTACATACCTTAATAAGAAAGTCTTGGATATTACCA
CTAAAAAACTATGGCTTAAAAACTGTTTCTAATTGGCTTGGATTTGAATGGGCACAGAAAAATGTAAGTGGCTCGAAAGC
ACTTTATTGGTGGATTCAATATCAAATTACAGAAAACCAAATATTTTTAAAGAAAATTATCCAATATAACAAAGATGATT
GTTTTGCTACTCTACAAATTGCAGAATATTTAATCAAAAATCGATTAAAGAAAAATTGA

Upstream 100 bases:

>100_bases
TCTAATTTATCAGCTCTCAAATTTCAAATTTCCTTGATTTCTTCTAATTATCTATACTAATTTATATGAGTAAATTTTAA
AACCGCCCTTAAAAAATAAT

Downstream 100 bases:

>100_bases
CCCTACAGATTTATTTATAATAATTTTTCCAAAAATTTCTGAAAAAAAATAACTTTCTTCCTTTAAATATTTTCTTTTTA
TCATAGCTAAACCTTTTGTT

Product: RecB family nuclease

Products: NA

Alternate protein names: RecB Family-Like Nuclease; Nuclease; Transposase IS; DNA Repair Protein; Nuclease-Like Protein

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MNSLHLKSFTRCKRKAWLDFKGKKSYEVWSPHKAIDKINQFQIFSEFCNGEIYSGLKACENGYQGVIGLKIKGNLFQNIN
AEILPQLLLKTKGKSKWGEYKYLPAVYKLGHKTTKEHLFDLAFCSMLLESFQESKIEKGLVISTFYKKVKVEEIYLNKKL
RKKVLNVLLNLNECLEGSIPEITQDRKKCTICSWQKFCDKEAKENGYLTDIDGIGSKTASLLNANGITNTQTLASCSEKQ
LVEKLSTFKDQKYEKASIFVKQAQAYISGEPYFISNKNNTEDLLEKICSGFYIFDIESNPDEKHDFLYGFLKVNNLSIKK
EDLTYEPILNLKNNEGESYSQIIEKLFSHKELPVLHYGETEKISIINIAKELNFSFEEIDSLTSRFIDLHTLIRKSWILP
LKNYGLKTVSNWLGFEWAQKNVSGSKALYWWIQYQITENQIFLKKIIQYNKDDCFATLQIAEYLIKNRLKKN

Sequences:

>Translated_472_residues
MNSLHLKSFTRCKRKAWLDFKGKKSYEVWSPHKAIDKINQFQIFSEFCNGEIYSGLKACENGYQGVIGLKIKGNLFQNIN
AEILPQLLLKTKGKSKWGEYKYLPAVYKLGHKTTKEHLFDLAFCSMLLESFQESKIEKGLVISTFYKKVKVEEIYLNKKL
RKKVLNVLLNLNECLEGSIPEITQDRKKCTICSWQKFCDKEAKENGYLTDIDGIGSKTASLLNANGITNTQTLASCSEKQ
LVEKLSTFKDQKYEKASIFVKQAQAYISGEPYFISNKNNTEDLLEKICSGFYIFDIESNPDEKHDFLYGFLKVNNLSIKK
EDLTYEPILNLKNNEGESYSQIIEKLFSHKELPVLHYGETEKISIINIAKELNFSFEEIDSLTSRFIDLHTLIRKSWILP
LKNYGLKTVSNWLGFEWAQKNVSGSKALYWWIQYQITENQIFLKKIIQYNKDDCFATLQIAEYLIKNRLKKN
>Mature_472_residues
MNSLHLKSFTRCKRKAWLDFKGKKSYEVWSPHKAIDKINQFQIFSEFCNGEIYSGLKACENGYQGVIGLKIKGNLFQNIN
AEILPQLLLKTKGKSKWGEYKYLPAVYKLGHKTTKEHLFDLAFCSMLLESFQESKIEKGLVISTFYKKVKVEEIYLNKKL
RKKVLNVLLNLNECLEGSIPEITQDRKKCTICSWQKFCDKEAKENGYLTDIDGIGSKTASLLNANGITNTQTLASCSEKQ
LVEKLSTFKDQKYEKASIFVKQAQAYISGEPYFISNKNNTEDLLEKICSGFYIFDIESNPDEKHDFLYGFLKVNNLSIKK
EDLTYEPILNLKNNEGESYSQIIEKLFSHKELPVLHYGETEKISIINIAKELNFSFEEIDSLTSRFIDLHTLIRKSWILP
LKNYGLKTVSNWLGFEWAQKNVSGSKALYWWIQYQITENQIFLKKIIQYNKDDCFATLQIAEYLIKNRLKKN

Specific function: Unknown

COG id: COG2251

COG function: function code R; Predicted nuclease (RecB family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54763; Mature: 54763

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLHLKSFTRCKRKAWLDFKGKKSYEVWSPHKAIDKINQFQIFSEFCNGEIYSGLKACE
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
NGYQGVIGLKIKGNLFQNINAEILPQLLLKTKGKSKWGEYKYLPAVYKLGHKTTKEHLFD
CCCCCEEEEEEECCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHH
LAFCSMLLESFQESKIEKGLVISTFYKKVKVEEIYLNKKLRKKVLNVLLNLNECLEGSIP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EITQDRKKCTICSWQKFCDKEAKENGYLTDIDGIGSKTASLLNANGITNTQTLASCSEKQ
HHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHH
LVEKLSTFKDQKYEKASIFVKQAQAYISGEPYFISNKNNTEDLLEKICSGFYIFDIESNP
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCEEEEEECCCC
DEKHDFLYGFLKVNNLSIKKEDLTYEPILNLKNNEGESYSQIIEKLFSHKELPVLHYGET
CCCHHHEEEEEEECCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCC
EKISIINIAKELNFSFEEIDSLTSRFIDLHTLIRKSWILPLKNYGLKTVSNWLGFEWAQK
CCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHCHHHHHC
NVSGSKALYWWIQYQITENQIFLKKIIQYNKDDCFATLQIAEYLIKNRLKKN
CCCCCCEEEEEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSLHLKSFTRCKRKAWLDFKGKKSYEVWSPHKAIDKINQFQIFSEFCNGEIYSGLKACE
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
NGYQGVIGLKIKGNLFQNINAEILPQLLLKTKGKSKWGEYKYLPAVYKLGHKTTKEHLFD
CCCCCEEEEEEECCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHH
LAFCSMLLESFQESKIEKGLVISTFYKKVKVEEIYLNKKLRKKVLNVLLNLNECLEGSIP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EITQDRKKCTICSWQKFCDKEAKENGYLTDIDGIGSKTASLLNANGITNTQTLASCSEKQ
HHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHH
LVEKLSTFKDQKYEKASIFVKQAQAYISGEPYFISNKNNTEDLLEKICSGFYIFDIESNP
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCEEEEEECCCC
DEKHDFLYGFLKVNNLSIKKEDLTYEPILNLKNNEGESYSQIIEKLFSHKELPVLHYGET
CCCHHHEEEEEEECCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCC
EKISIINIAKELNFSFEEIDSLTSRFIDLHTLIRKSWILPLKNYGLKTVSNWLGFEWAQK
CCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHCHHHHHC
NVSGSKALYWWIQYQITENQIFLKKIIQYNKDDCFATLQIAEYLIKNRLKKN
CCCCCCEEEEEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA