Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123967824

Identifier: 123967824

GI number: 123967824

Start: 265480

End: 266040

Strand: Direct

Name: 123967824

Synonym: A9601_02871

Alternate gene names: NA

Gene position: 265480-266040 (Clockwise)

Preceding gene: 123967823

Following gene: 123967826

Centisome position: 15.9

GC content: 36.54

Gene sequence:

>561_bases
ATGGAAGACAAAGCACAAACTAATCAGGTTCAAGCTGCAAGTATAAATAGAGCTAAAGCGCCGCAAAAAGTTGAAGTTGT
AGTTGCAAATTCATCTTCAGGGTCAGAAGTAAATATCCTTGGAGAACTATCGATTTTTGTTTTAAGAATAGGTTTTTGTG
CTTTGATGATTCATCATGGCCTAGAAAAACTTCAGGATCCACAAGGATTTGCTGAGTTTGTAGTTGGTAAGTACTTCCCA
TTTTTGCCAGGAGATCCTGTTATTTGGACTTTTGGAGCAGCAATTACTCAATTAGTATGTCCAATAGGATTAGCTTTAGG
AATTTTTGCTAGGCTTTCTTCACTTGGTCTACTCTCCACTATGGCATTTGCTGTTTATTTTCATCTCCTAGATACTGGAC
TAGAAGGTTTTCCTTTGGCAGTGGTTGAAGGTCATAATTATGCTTTCGAATTATCTTTTATATACGGGGCTATTTCCCTC
TACTTTCTATGTGCAGGTCCAGGCAGGCTATCTTTATTTAGAAAAACTAACAAGATTACATATTATCCAAAATCAACATA
A

Upstream 100 bases:

>100_bases
TGTTATTCATTTATAAATTTGCTTAGTTTTTTAAATTTATTAGTCAGATAATTCCAAAAGATCAACTTTATTAACTAGAA
TAATGAAAACTTAATGAAGT

Downstream 100 bases:

>100_bases
TTTAATGTAAAAAATGTCTTTTTTGCGTAAATACCATTGAGATTCCTTTTGAATTACACATATCAATACTTTCTTGGTCT
CTTAGACTTCCTCCAGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MEDKAQTNQVQAASINRAKAPQKVEVVVANSSSGSEVNILGELSIFVLRIGFCALMIHHGLEKLQDPQGFAEFVVGKYFP
FLPGDPVIWTFGAAITQLVCPIGLALGIFARLSSLGLLSTMAFAVYFHLLDTGLEGFPLAVVEGHNYAFELSFIYGAISL
YFLCAGPGRLSLFRKTNKITYYPKST

Sequences:

>Translated_186_residues
MEDKAQTNQVQAASINRAKAPQKVEVVVANSSSGSEVNILGELSIFVLRIGFCALMIHHGLEKLQDPQGFAEFVVGKYFP
FLPGDPVIWTFGAAITQLVCPIGLALGIFARLSSLGLLSTMAFAVYFHLLDTGLEGFPLAVVEGHNYAFELSFIYGAISL
YFLCAGPGRLSLFRKTNKITYYPKST
>Mature_186_residues
MEDKAQTNQVQAASINRAKAPQKVEVVVANSSSGSEVNILGELSIFVLRIGFCALMIHHGLEKLQDPQGFAEFVVGKYFP
FLPGDPVIWTFGAAITQLVCPIGLALGIFARLSSLGLLSTMAFAVYFHLLDTGLEGFPLAVVEGHNYAFELSFIYGAISL
YFLCAGPGRLSLFRKTNKITYYPKST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20229; Mature: 20229

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDKAQTNQVQAASINRAKAPQKVEVVVANSSSGSEVNILGELSIFVLRIGFCALMIHHG
CCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
LEKLQDPQGFAEFVVGKYFPFLPGDPVIWTFGAAITQLVCPIGLALGIFARLSSLGLLST
HHHHCCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAFAVYFHLLDTGLEGFPLAVVEGHNYAFELSFIYGAISLYFLCAGPGRLSLFRKTNKIT
HHHHHHHHHHHCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCEEE
YYPKST
EECCCC
>Mature Secondary Structure
MEDKAQTNQVQAASINRAKAPQKVEVVVANSSSGSEVNILGELSIFVLRIGFCALMIHHG
CCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
LEKLQDPQGFAEFVVGKYFPFLPGDPVIWTFGAAITQLVCPIGLALGIFARLSSLGLLST
HHHHCCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAFAVYFHLLDTGLEGFPLAVVEGHNYAFELSFIYGAISLYFLCAGPGRLSLFRKTNKIT
HHHHHHHHHHHCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCEEE
YYPKST
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA