Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is sfsA [H]

Identifier: 123967821

GI number: 123967821

Start: 261710

End: 262450

Strand: Direct

Name: sfsA [H]

Synonym: A9601_02841

Alternate gene names: 123967821

Gene position: 261710-262450 (Clockwise)

Preceding gene: 123967819

Following gene: 123967822

Centisome position: 15.67

GC content: 33.33

Gene sequence:

>741_bases
ATGAATGATCGGATAATTGATTTTGATCCATTAATAGAAGGGGTTTTAATTAAGAGGTATAAAAGGTTTCTTGCAGATAT
TGAATTAGAAAGTGGAGAGGTAGTAACTGCTCATTGTGCTAACACTGGCCCAATGAAGGGACTTTTGAGTGAGGGGGCAA
AAGTGAGAATAAGTTTTTCCCCTTCTCCAAAAAGAAAATTACCTTTTACTTGGGAACAGATATGTGTTTTTAATGCAAAA
AATGAGGAGGTTTGGGTAGGTATTAATACTCTATTTGCAAATAAGTTAATCAAAAAGGTTATTGAGAAAAATCTGCTAAT
AGAAAAAATAGGTGAAATAGAGACAATTAAATCTGAAGTTCCTTATGGAAAAGATAAAAAAAGCAGAATTGACTTTTTTT
TAACCCCAAAATCTTCAAATCCTGATAAACGTAACATTTTCATTGAGGTTAAAAATACGACTTGGATTAAAGAAAATGTA
GCTCTATTCCCAGATACAGTCACGAAAAGAGGCCAAAAACATCTTATGGAATTAAAGGAATTAATTCCTGAAAGTAAAAG
TGTGTTGGCACTTTGCATAACGAGAAAAGACGCTTGTTTTTTTGCCCCTGGAGATGATGCAGATCCCTTATACGGCAGTC
TCTTTAGAGAATCTTTAAGTGCAGGAATGATAACTATCCCATGTTCTTTTGAATTTCATAAAGACCACGTATCATGGAGA
GGAATTAAACCTTTGAAATAA

Upstream 100 bases:

>100_bases
AAAAACATTATTTTTTAAAAATGAATGCATTTGGATTCGTCTAATTTTTTCAATCAGTTTAAGTTTCAATTATATTTGAT
TTCAAACTAACGACATATTT

Downstream 100 bases:

>100_bases
ATTAAATCTTGATAATTTGAAACTCTTAAAAAAAAGATTTTTAAATTTAACAGATATAGTTTTATGGTGCAACTATAAAA
TTGGTAACAACGACTACTAG

Product: sugar fermentation stimulation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MNDRIIDFDPLIEGVLIKRYKRFLADIELESGEVVTAHCANTGPMKGLLSEGAKVRISFSPSPKRKLPFTWEQICVFNAK
NEEVWVGINTLFANKLIKKVIEKNLLIEKIGEIETIKSEVPYGKDKKSRIDFFLTPKSSNPDKRNIFIEVKNTTWIKENV
ALFPDTVTKRGQKHLMELKELIPESKSVLALCITRKDACFFAPGDDADPLYGSLFRESLSAGMITIPCSFEFHKDHVSWR
GIKPLK

Sequences:

>Translated_246_residues
MNDRIIDFDPLIEGVLIKRYKRFLADIELESGEVVTAHCANTGPMKGLLSEGAKVRISFSPSPKRKLPFTWEQICVFNAK
NEEVWVGINTLFANKLIKKVIEKNLLIEKIGEIETIKSEVPYGKDKKSRIDFFLTPKSSNPDKRNIFIEVKNTTWIKENV
ALFPDTVTKRGQKHLMELKELIPESKSVLALCITRKDACFFAPGDDADPLYGSLFRESLSAGMITIPCSFEFHKDHVSWR
GIKPLK
>Mature_246_residues
MNDRIIDFDPLIEGVLIKRYKRFLADIELESGEVVTAHCANTGPMKGLLSEGAKVRISFSPSPKRKLPFTWEQICVFNAK
NEEVWVGINTLFANKLIKKVIEKNLLIEKIGEIETIKSEVPYGKDKKSRIDFFLTPKSSNPDKRNIFIEVKNTTWIKENV
ALFPDTVTKRGQKHLMELKELIPESKSVLALCITRKDACFFAPGDDADPLYGSLFRESLSAGMITIPCSFEFHKDHVSWR
GIKPLK

Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]

COG id: COG1489

COG function: function code R; DNA-binding protein, stimulates sugar fermentation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sfsA family [H]

Homologues:

Organism=Escherichia coli, GI1786340, Length=215, Percent_Identity=39.0697674418605, Blast_Score=137, Evalue=7e-34,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005224 [H]

Pfam domain/function: PF03749 SfsA [H]

EC number: NA

Molecular weight: Translated: 27987; Mature: 27987

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRIIDFDPLIEGVLIKRYKRFLADIELESGEVVTAHCANTGPMKGLLSEGAKVRISFS
CCCCEECHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHCCCCEEEEEEC
PSPKRKLPFTWEQICVFNAKNEEVWVGINTLFANKLIKKVIEKNLLIEKIGEIETIKSEV
CCCCCCCCCCHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
PYGKDKKSRIDFFLTPKSSNPDKRNIFIEVKNTTWIKENVALFPDTVTKRGQKHLMELKE
CCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEEEECCCEECCHHHHHHHHHHHHHHHH
LIPESKSVLALCITRKDACFFAPGDDADPLYGSLFRESLSAGMITIPCSFEFHKDHVSWR
HCCCCCCEEEEEEECCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECEEECCCCCCCC
GIKPLK
CCCCCC
>Mature Secondary Structure
MNDRIIDFDPLIEGVLIKRYKRFLADIELESGEVVTAHCANTGPMKGLLSEGAKVRISFS
CCCCEECHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHCCCCEEEEEEC
PSPKRKLPFTWEQICVFNAKNEEVWVGINTLFANKLIKKVIEKNLLIEKIGEIETIKSEV
CCCCCCCCCCHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
PYGKDKKSRIDFFLTPKSSNPDKRNIFIEVKNTTWIKENVALFPDTVTKRGQKHLMELKE
CCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEEEECCCEECCHHHHHHHHHHHHHHHH
LIPESKSVLALCITRKDACFFAPGDDADPLYGSLFRESLSAGMITIPCSFEFHKDHVSWR
HCCCCCCEEEEEEECCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECEEECCCCCCCC
GIKPLK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA