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The map label for this gene is psbN

Identifier: 123967811

GI number: 123967811

Start: 252269

End: 252421

Strand: Direct

Name: psbN

Synonym: A9601_02741

Alternate gene names: 123967811

Gene position: 252269-252421 (Clockwise)

Preceding gene: 123967807

Following gene: 123967812

Centisome position: 15.11

GC content: 43.14

Gene sequence:

>153_bases
ATGCAAACTTTATCATCTGCTCCAGATCCTGCAGTTTCCATAGCAGTAACAATTCTGGCATTACTTCTGGCTTTAACCGG
TTTTGGTCTTTGGACTGCTTTTGGACCCAAAGCCGCAAAGCTTACCGATCCTTGGGATGATCATGATGATTAA

Upstream 100 bases:

>100_bases
TAATGCTGTTTTTTGACCCATTTGAATTCACAAAATCGAATATTATTTCGCTATTGTATAAGAACTTATACATAAATTGT
TTACAAACTTAGCAAAATTG

Downstream 100 bases:

>100_bases
TCTCCATTAAAGTATTTCAAAATTTTCCAAAAATACAAAAAGTAAACATTTACTCATAGTTTAACTATAAATTTAATAAG
ATATAAACCTGTCAGCACAA

Product: photosystem II reaction center protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 50; Mature: 50

Protein sequence:

>50_residues
MQTLSSAPDPAVSIAVTILALLLALTGFGLWTAFGPKAAKLTDPWDDHDD

Sequences:

>Translated_50_residues
MQTLSSAPDPAVSIAVTILALLLALTGFGLWTAFGPKAAKLTDPWDDHDD
>Mature_50_residues
MQTLSSAPDPAVSIAVTILALLLALTGFGLWTAFGPKAAKLTDPWDDHDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbN family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBN_PROM0 (A3PAX4)

Other databases:

- EMBL:   CP000576
- RefSeq:   YP_001090500.1
- STRING:   A3PAX4
- GeneID:   4912773
- GenomeReviews:   CP000576_GR
- KEGG:   pmg:P9301_02761
- HOGENOM:   HBG710424
- OMA:   SAFGPKA
- ProtClustDB:   PRK13183
- BioCyc:   PMAR167546:P9301ORF_0279-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_00293
- InterPro:   IPR003398
- ProDom:   PD005510

Pfam domain/function: PF02468 PsbN

EC number: NA

Molecular weight: Translated: 5253; Mature: 5253

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1e2c22c0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLSSAPDPAVSIAVTILALLLALTGFGLWTAFGPKAAKLTDPWDDHDD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
>Mature Secondary Structure
MQTLSSAPDPAVSIAVTILALLLALTGFGLWTAFGPKAAKLTDPWDDHDD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA