Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123967806

Identifier: 123967806

GI number: 123967806

Start: 249602

End: 250567

Strand: Direct

Name: 123967806

Synonym: A9601_02691

Alternate gene names: NA

Gene position: 249602-250567 (Clockwise)

Preceding gene: 123967805

Following gene: 123967807

Centisome position: 14.95

GC content: 26.92

Gene sequence:

>966_bases
GTGGCTTGGATTTTAATTGTTTTTTTAATATTACTCGGGGGATTAATTGCACCATTTGGGGATATTCTTGGAACAAAGAT
TGGTAAAGCAAGATTTAGCATCTTAAAGTTAAGACCTAAAAAAACAGCGACTATAATAACCATTATTACCGGTGGTTTTA
TTAGTTCAATATCGATAGGGTTATTGATTTTAGTTAGTGAAGAATTCAGGCAAAGGCTTTTTGTTGATATACCTTTTTTG
CAAAAAACTCTAGATGAAAGTAAAAAGGCTTTAATCCCTTTACAGGAAGAACGAAAAGAACTTGAAGGTAAAATTATTCA
AAAAGAAAAAGATTTAAATCAATTAAAAAATAATATTAAAGAATTTAGGAGAGGAAATATTGTTATTAGGAGAGGACAAA
CTTTATTTATTGCAGAGCTTAATTCCAACTCAAATGTAAAACTAGACTTAACAAAAATCTATAATGAAGCTGATAAATTT
GTCAGGAAAATTGTTATCCCAACTAATAAAGAAGCAAAAAATATTCTTTTGTGGAGACCAAGTGATATCACAAAAATTGA
GACAATAGCTGCTAGAAATGGCAACTGGATTTTATTAATTAAATCAGCAACAAATGTTTTAAAAGGGGATAATTATGTTT
TTGTATCTCCTGATTTATTAGAGAATAAATTTATAGTCAAAAAAGGAGAAGTGATTACAAGTTCAATATTGTTAGAAAGT
GATTTAAATATTAAATCAATAAATTTAAAAATTAAATCATTACTTAGAGAAACAAGGGATGTAATTAAGTCAAAAGGATC
ACAAGTTAGTGAAATCAAGACAAATGGAAATTTTGTAAAAAGAATTAGAGACTTTCTTCAAGAAAATCAAAATATCAAAT
TTAAGTTAGAAGTAGTATCTTTGAGAGATAGTAAAACTGTAGAACCCATAGTTGTTGAGATTAATATTTTAAAAATTGTA
TCCTAA

Upstream 100 bases:

>100_bases
TATTGAAAGAAAAAAGATCACAGTTTTCGATCCAATTGCTCTTGCAAAAAGATTTAATTGATTCATCATAAATTATGATG
TACTGAGTTTATGCAAAAGT

Downstream 100 bases:

>100_bases
ATGCCTAAAGTTATAACTATTGATCCAGGGCGGAATAAATGCGGCTTAGTCTTAGCTGAAATAAGTCAAAAAAAGGTTTA
TGAAGCGATCATTCTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MAWILIVFLILLGGLIAPFGDILGTKIGKARFSILKLRPKKTATIITIITGGFISSISIGLLILVSEEFRQRLFVDIPFL
QKTLDESKKALIPLQEERKELEGKIIQKEKDLNQLKNNIKEFRRGNIVIRRGQTLFIAELNSNSNVKLDLTKIYNEADKF
VRKIVIPTNKEAKNILLWRPSDITKIETIAARNGNWILLIKSATNVLKGDNYVFVSPDLLENKFIVKKGEVITSSILLES
DLNIKSINLKIKSLLRETRDVIKSKGSQVSEIKTNGNFVKRIRDFLQENQNIKFKLEVVSLRDSKTVEPIVVEINILKIV
S

Sequences:

>Translated_321_residues
MAWILIVFLILLGGLIAPFGDILGTKIGKARFSILKLRPKKTATIITIITGGFISSISIGLLILVSEEFRQRLFVDIPFL
QKTLDESKKALIPLQEERKELEGKIIQKEKDLNQLKNNIKEFRRGNIVIRRGQTLFIAELNSNSNVKLDLTKIYNEADKF
VRKIVIPTNKEAKNILLWRPSDITKIETIAARNGNWILLIKSATNVLKGDNYVFVSPDLLENKFIVKKGEVITSSILLES
DLNIKSINLKIKSLLRETRDVIKSKGSQVSEIKTNGNFVKRIRDFLQENQNIKFKLEVVSLRDSKTVEPIVVEINILKIV
S
>Mature_320_residues
AWILIVFLILLGGLIAPFGDILGTKIGKARFSILKLRPKKTATIITIITGGFISSISIGLLILVSEEFRQRLFVDIPFLQ
KTLDESKKALIPLQEERKELEGKIIQKEKDLNQLKNNIKEFRRGNIVIRRGQTLFIAELNSNSNVKLDLTKIYNEADKFV
RKIVIPTNKEAKNILLWRPSDITKIETIAARNGNWILLIKSATNVLKGDNYVFVSPDLLENKFIVKKGEVITSSILLESD
LNIKSINLKIKSLLRETRDVIKSKGSQVSEIKTNGNFVKRIRDFLQENQNIKFKLEVVSLRDSKTVEPIVVEINILKIVS

Specific function: Unknown

COG id: COG4372

COG function: function code S; Uncharacterized protein conserved in bacteria with the myosin-like domain

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021435 [H]

Pfam domain/function: PF11283 DUF3084 [H]

EC number: NA

Molecular weight: Translated: 36459; Mature: 36328

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWILIVFLILLGGLIAPFGDILGTKIGKARFSILKLRPKKTATIITIITGGFISSISIG
CHHHHHHHHHHHHHHHHHHHHHHHCHHCHHHEEEEEECCCCCEEEEEEEECCHHHHHHHH
LLILVSEEFRQRLFVDIPFLQKTLDESKKALIPLQEERKELEGKIIQKEKDLNQLKNNIK
EEEEEEHHHHHHHEEECHHHHHHHCCHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
EFRRGNIVIRRGQTLFIAELNSNSNVKLDLTKIYNEADKFVRKIVIPTNKEAKNILLWRP
HHHCCCEEEEECCEEEEEEECCCCCEEEEHHHHHHHHHHHHHEEECCCCCCCCEEEEECC
SDITKIETIAARNGNWILLIKSATNVLKGDNYVFVSPDLLENKFIVKKGEVITSSILLES
CCCCEEEEEEECCCCEEEEEECCCCHHCCCCEEEECCHHHCCCEEEECCCEEEEEEEEEC
DLNIKSINLKIKSLLRETRDVIKSKGSQVSEIKTNGNFVKRIRDFLQENQNIKFKLEVVS
CCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEE
LRDSKTVEPIVVEINILKIVS
ECCCCCCCEEEEEEEEEEEEC
>Mature Secondary Structure 
AWILIVFLILLGGLIAPFGDILGTKIGKARFSILKLRPKKTATIITIITGGFISSISIG
HHHHHHHHHHHHHHHHHHHHHHHCHHCHHHEEEEEECCCCCEEEEEEEECCHHHHHHHH
LLILVSEEFRQRLFVDIPFLQKTLDESKKALIPLQEERKELEGKIIQKEKDLNQLKNNIK
EEEEEEHHHHHHHEEECHHHHHHHCCHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
EFRRGNIVIRRGQTLFIAELNSNSNVKLDLTKIYNEADKFVRKIVIPTNKEAKNILLWRP
HHHCCCEEEEECCEEEEEEECCCCCEEEEHHHHHHHHHHHHHEEECCCCCCCCEEEEECC
SDITKIETIAARNGNWILLIKSATNVLKGDNYVFVSPDLLENKFIVKKGEVITSSILLES
CCCCEEEEEEECCCCEEEEEECCCCHHCCCCEEEECCHHHCCCEEEECCCEEEEEEEEEC
DLNIKSINLKIKSLLRETRDVIKSKGSQVSEIKTNGNFVKRIRDFLQENQNIKFKLEVVS
CCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEE
LRDSKTVEPIVVEINILKIVS
ECCCCCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840; 8391534 [H]