| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967806
Identifier: 123967806
GI number: 123967806
Start: 249602
End: 250567
Strand: Direct
Name: 123967806
Synonym: A9601_02691
Alternate gene names: NA
Gene position: 249602-250567 (Clockwise)
Preceding gene: 123967805
Following gene: 123967807
Centisome position: 14.95
GC content: 26.92
Gene sequence:
>966_bases GTGGCTTGGATTTTAATTGTTTTTTTAATATTACTCGGGGGATTAATTGCACCATTTGGGGATATTCTTGGAACAAAGAT TGGTAAAGCAAGATTTAGCATCTTAAAGTTAAGACCTAAAAAAACAGCGACTATAATAACCATTATTACCGGTGGTTTTA TTAGTTCAATATCGATAGGGTTATTGATTTTAGTTAGTGAAGAATTCAGGCAAAGGCTTTTTGTTGATATACCTTTTTTG CAAAAAACTCTAGATGAAAGTAAAAAGGCTTTAATCCCTTTACAGGAAGAACGAAAAGAACTTGAAGGTAAAATTATTCA AAAAGAAAAAGATTTAAATCAATTAAAAAATAATATTAAAGAATTTAGGAGAGGAAATATTGTTATTAGGAGAGGACAAA CTTTATTTATTGCAGAGCTTAATTCCAACTCAAATGTAAAACTAGACTTAACAAAAATCTATAATGAAGCTGATAAATTT GTCAGGAAAATTGTTATCCCAACTAATAAAGAAGCAAAAAATATTCTTTTGTGGAGACCAAGTGATATCACAAAAATTGA GACAATAGCTGCTAGAAATGGCAACTGGATTTTATTAATTAAATCAGCAACAAATGTTTTAAAAGGGGATAATTATGTTT TTGTATCTCCTGATTTATTAGAGAATAAATTTATAGTCAAAAAAGGAGAAGTGATTACAAGTTCAATATTGTTAGAAAGT GATTTAAATATTAAATCAATAAATTTAAAAATTAAATCATTACTTAGAGAAACAAGGGATGTAATTAAGTCAAAAGGATC ACAAGTTAGTGAAATCAAGACAAATGGAAATTTTGTAAAAAGAATTAGAGACTTTCTTCAAGAAAATCAAAATATCAAAT TTAAGTTAGAAGTAGTATCTTTGAGAGATAGTAAAACTGTAGAACCCATAGTTGTTGAGATTAATATTTTAAAAATTGTA TCCTAA
Upstream 100 bases:
>100_bases TATTGAAAGAAAAAAGATCACAGTTTTCGATCCAATTGCTCTTGCAAAAAGATTTAATTGATTCATCATAAATTATGATG TACTGAGTTTATGCAAAAGT
Downstream 100 bases:
>100_bases ATGCCTAAAGTTATAACTATTGATCCAGGGCGGAATAAATGCGGCTTAGTCTTAGCTGAAATAAGTCAAAAAAAGGTTTA TGAAGCGATCATTCTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MAWILIVFLILLGGLIAPFGDILGTKIGKARFSILKLRPKKTATIITIITGGFISSISIGLLILVSEEFRQRLFVDIPFL QKTLDESKKALIPLQEERKELEGKIIQKEKDLNQLKNNIKEFRRGNIVIRRGQTLFIAELNSNSNVKLDLTKIYNEADKF VRKIVIPTNKEAKNILLWRPSDITKIETIAARNGNWILLIKSATNVLKGDNYVFVSPDLLENKFIVKKGEVITSSILLES DLNIKSINLKIKSLLRETRDVIKSKGSQVSEIKTNGNFVKRIRDFLQENQNIKFKLEVVSLRDSKTVEPIVVEINILKIV S
Sequences:
>Translated_321_residues MAWILIVFLILLGGLIAPFGDILGTKIGKARFSILKLRPKKTATIITIITGGFISSISIGLLILVSEEFRQRLFVDIPFL QKTLDESKKALIPLQEERKELEGKIIQKEKDLNQLKNNIKEFRRGNIVIRRGQTLFIAELNSNSNVKLDLTKIYNEADKF VRKIVIPTNKEAKNILLWRPSDITKIETIAARNGNWILLIKSATNVLKGDNYVFVSPDLLENKFIVKKGEVITSSILLES DLNIKSINLKIKSLLRETRDVIKSKGSQVSEIKTNGNFVKRIRDFLQENQNIKFKLEVVSLRDSKTVEPIVVEINILKIV S >Mature_320_residues AWILIVFLILLGGLIAPFGDILGTKIGKARFSILKLRPKKTATIITIITGGFISSISIGLLILVSEEFRQRLFVDIPFLQ KTLDESKKALIPLQEERKELEGKIIQKEKDLNQLKNNIKEFRRGNIVIRRGQTLFIAELNSNSNVKLDLTKIYNEADKFV RKIVIPTNKEAKNILLWRPSDITKIETIAARNGNWILLIKSATNVLKGDNYVFVSPDLLENKFIVKKGEVITSSILLESD LNIKSINLKIKSLLRETRDVIKSKGSQVSEIKTNGNFVKRIRDFLQENQNIKFKLEVVSLRDSKTVEPIVVEINILKIVS
Specific function: Unknown
COG id: COG4372
COG function: function code S; Uncharacterized protein conserved in bacteria with the myosin-like domain
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021435 [H]
Pfam domain/function: PF11283 DUF3084 [H]
EC number: NA
Molecular weight: Translated: 36459; Mature: 36328
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWILIVFLILLGGLIAPFGDILGTKIGKARFSILKLRPKKTATIITIITGGFISSISIG CHHHHHHHHHHHHHHHHHHHHHHHCHHCHHHEEEEEECCCCCEEEEEEEECCHHHHHHHH LLILVSEEFRQRLFVDIPFLQKTLDESKKALIPLQEERKELEGKIIQKEKDLNQLKNNIK EEEEEEHHHHHHHEEECHHHHHHHCCHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH EFRRGNIVIRRGQTLFIAELNSNSNVKLDLTKIYNEADKFVRKIVIPTNKEAKNILLWRP HHHCCCEEEEECCEEEEEEECCCCCEEEEHHHHHHHHHHHHHEEECCCCCCCCEEEEECC SDITKIETIAARNGNWILLIKSATNVLKGDNYVFVSPDLLENKFIVKKGEVITSSILLES CCCCEEEEEEECCCCEEEEEECCCCHHCCCCEEEECCHHHCCCEEEECCCEEEEEEEEEC DLNIKSINLKIKSLLRETRDVIKSKGSQVSEIKTNGNFVKRIRDFLQENQNIKFKLEVVS CCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEE LRDSKTVEPIVVEINILKIVS ECCCCCCCEEEEEEEEEEEEC >Mature Secondary Structure AWILIVFLILLGGLIAPFGDILGTKIGKARFSILKLRPKKTATIITIITGGFISSISIG HHHHHHHHHHHHHHHHHHHHHHHCHHCHHHEEEEEECCCCCEEEEEEEECCHHHHHHHH LLILVSEEFRQRLFVDIPFLQKTLDESKKALIPLQEERKELEGKIIQKEKDLNQLKNNIK EEEEEEHHHHHHHEEECHHHHHHHCCHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH EFRRGNIVIRRGQTLFIAELNSNSNVKLDLTKIYNEADKFVRKIVIPTNKEAKNILLWRP HHHCCCEEEEECCEEEEEEECCCCCEEEEHHHHHHHHHHHHHEEECCCCCCCCEEEEECC SDITKIETIAARNGNWILLIKSATNVLKGDNYVFVSPDLLENKFIVKKGEVITSSILLES CCCCEEEEEEECCCCEEEEEECCCCHHCCCCEEEECCHHHCCCEEEECCCEEEEEEEEEC DLNIKSINLKIKSLLRETRDVIKSKGSQVSEIKTNGNFVKRIRDFLQENQNIKFKLEVVS CCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEE LRDSKTVEPIVVEINILKIVS ECCCCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11759840; 8391534 [H]