| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is txlA [H]
Identifier: 123967801
GI number: 123967801
Start: 246340
End: 246810
Strand: Direct
Name: txlA [H]
Synonym: A9601_02641
Alternate gene names: 123967801
Gene position: 246340-246810 (Clockwise)
Preceding gene: 123967799
Following gene: 123967805
Centisome position: 14.75
GC content: 27.81
Gene sequence:
>471_bases ATGATTTCATTGCTTTTGTTTAAAAATTTCTTTTTTAGATCAACTTATCTTTTAAAGAGTTTTGGAGAATTATCCGTTGA CCCTGAAATAGCTTTTGTAAATAATAAGCCTACATTTCTGGAATTTTATGCTGAGTGGTGTGAAGTTTGCAAAGAAACGG CTCCACAAGTTTCTGCTTTTAAAGATGAATATGAAAAAGATATTAATTTTGTTTTTTTAAATGTTGATAATCAAAAATGG GGTAATTACATTCAGAAGTTTGCCGTCAACGGGATTCCTCAAGTTAATCTTTTTGATAAAAAGGGTAATCTAATTTCTAC TTTTATTGGTAAACAAGACGAAATAAAAATAAGAGAATCTATTAATAATTTAAAAAAAGGAGAGAAACCCTTTGAGGAGA TTATTAATTCTGAATTTTCAATCATTCAAGAAAATAAAAATAATGAGGTTAGTCCTCGTAGTCATGGATAA
Upstream 100 bases:
>100_bases GTTCTTAGTTAGTAATACTTGAATAGTGCAATCTGAGAGTCAAGACCAAATTTTAAAGTCAAATTTAAAAATAATATTTA TTTTGATTATATCTATTGTT
Downstream 100 bases:
>100_bases TTTTTACCATGCTAAAGATTTTGATACAATCGGAAAACTTTGTTTAAAAATAGACTTGCAATTTTGGGCTATAGACTTAT GTTCTTTTTGGGTGCCGTGA
Product: thioredoxin-like protein TxlA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MISLLLFKNFFFRSTYLLKSFGELSVDPEIAFVNNKPTFLEFYAEWCEVCKETAPQVSAFKDEYEKDINFVFLNVDNQKW GNYIQKFAVNGIPQVNLFDKKGNLISTFIGKQDEIKIRESINNLKKGEKPFEEIINSEFSIIQENKNNEVSPRSHG
Sequences:
>Translated_156_residues MISLLLFKNFFFRSTYLLKSFGELSVDPEIAFVNNKPTFLEFYAEWCEVCKETAPQVSAFKDEYEKDINFVFLNVDNQKW GNYIQKFAVNGIPQVNLFDKKGNLISTFIGKQDEIKIRESINNLKKGEKPFEEIINSEFSIIQENKNNEVSPRSHG >Mature_156_residues MISLLLFKNFFFRSTYLLKSFGELSVDPEIAFVNNKPTFLEFYAEWCEVCKETAPQVSAFKDEYEKDINFVFLNVDNQKW GNYIQKFAVNGIPQVNLFDKKGNLISTFIGKQDEIKIRESINNLKKGEKPFEEIINSEFSIIQENKNNEVSPRSHG
Specific function: Required for disulfide bond formation in some proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 18164; Mature: 18164
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLLLFKNFFFRSTYLLKSFGELSVDPEIAFVNNKPTFLEFYAEWCEVCKETAPQVSAF CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHH KDEYEKDINFVFLNVDNQKWGNYIQKFAVNGIPQVNLFDKKGNLISTFIGKQDEIKIRES HHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCCCHHHHH INNLKKGEKPFEEIINSEFSIIQENKNNEVSPRSHG HHHHHCCCHHHHHHHCCHHEEEECCCCCCCCCCCCC >Mature Secondary Structure MISLLLFKNFFFRSTYLLKSFGELSVDPEIAFVNNKPTFLEFYAEWCEVCKETAPQVSAF CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHH KDEYEKDINFVFLNVDNQKWGNYIQKFAVNGIPQVNLFDKKGNLISTFIGKQDEIKIRES HHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCCCHHHHH INNLKKGEKPFEEIINSEFSIIQENKNNEVSPRSHG HHHHHCCCHHHHHHHCCHHEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]