Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123967768

Identifier: 123967768

GI number: 123967768

Start: 216047

End: 217045

Strand: Reverse

Name: 123967768

Synonym: A9601_02311

Alternate gene names: NA

Gene position: 217045-216047 (Counterclockwise)

Preceding gene: 123967770

Following gene: 123967767

Centisome position: 13.0

GC content: 34.63

Gene sequence:

>999_bases
ATGGAAATCAATCCAATTCTGCAAAATGTATTAGCCCCGCCTGTTCTTTTCTTTTTAATTGGAGCAATATCAGTACTCTT
TAAATCTGATTTAGAAATACCAGCTCCATTACCTAAACTCTTCTCATTGTATTTGCTCTTAGCCATTGGGTTTAAAGGAG
GTATAGAGATACAGAAAAGTGGGTTTACAAATCAAGTATTGCCGACTTTAAGCGCTGCAATACTAATGTCACTACTAATA
CCTCTGATTGGATTTTTAATTCTAAGATTTAAATTTGATGTCTTTAATTCAGCCGCAATAGCAGCAGCATACGGTTCAAT
TAGTGCTGTTACATTTATTTCTGCAGAAAGTTTTTTAGAAAGTCAAAAAATAGCTTTTGATGGGTTTATGGTTGGGGCTT
TAGCTTTAATGGAATCTCCTGCAATAATTGTTGGATTATTACTTGTGAAATTTGCAGCTCCAAAAAATAGACCAAAATCA
AGAAAAATGCATCTAAGCGCAATATTACACGAATCCCTTTTGAATGGATCAGTTTATTTATTGCTCTCAAGCTTGATTGT
AGGATTTCTCACTGCTTCCAGTAATCCCTCAGGAATTGAAAAAATGGAGCCTTTTACTGGACAATTATTCTATGGAGCAG
AATGCTTCTTCTTGTTAGATATGGGAATAGTTGCTGCTCAAAGATTACCGAGACTGAAAAATGCGGGTTCATTTTTGATT
GGATTTGCCATTTTTATGCCTTTATTTAACGCATTTATTGGTGTTTTCGTTGCAAGATTTTTATCTTTAGGACCTGGCAA
CGCACTTTTATTTGTGGTTTTATGTGCAAGCGCCTCTTATTTAGCAGTTCCCGCAGCAATGAGAATGACTGTTCCAGAAG
CTAAATCTAGTTATTATATTTCAACAACACTAGGTTTAACTTTCCCATTCAATATAGTTCTCGGCATTCCCATATATATG
AGTTTAGTAAATACTATTATCCCACTATCCTCTTTATAA

Upstream 100 bases:

>100_bases
AAAAGTAAAGGATAGATTAGCTAAGTTTGGAGTTGAAGGCATCATTGAGACAAGAAAAGAAGCTTTAGAAACCGCTCTAA
ATGAAATAGCCTAATAATTT

Downstream 100 bases:

>100_bases
AAATGAAAAGATTAGATTTGATATTTAGTGAAAGAGAACTAGATGCAATCATTAAAACATTAGAAAAAGCTAATGTTCCT
GGATATACAGTTATGAAACA

Product: putative sodium-dependent bicarbonate transporter

Products: NA

Alternate protein names: Sodium-Dependent Bicarbonate Transporter; Sodium Bicarbonate Cotransporter; SBT Type Permease Sodium-Bicarbonate; Membrane Permease; Conserved Domain Protein; Permease-Like Protein; Domain Transmembrane Protein

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MEINPILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQKSGFTNQVLPTLSAAILMSLLI
PLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLESQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKS
RKMHLSAILHESLLNGSVYLLLSSLIVGFLTASSNPSGIEKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI
GFAIFMPLFNAFIGVFVARFLSLGPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYISTTLGLTFPFNIVLGIPIYM
SLVNTIIPLSSL

Sequences:

>Translated_332_residues
MEINPILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQKSGFTNQVLPTLSAAILMSLLI
PLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLESQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKS
RKMHLSAILHESLLNGSVYLLLSSLIVGFLTASSNPSGIEKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI
GFAIFMPLFNAFIGVFVARFLSLGPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYISTTLGLTFPFNIVLGIPIYM
SLVNTIIPLSSL
>Mature_332_residues
MEINPILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQKSGFTNQVLPTLSAAILMSLLI
PLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLESQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKS
RKMHLSAILHESLLNGSVYLLLSSLIVGFLTASSNPSGIEKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI
GFAIFMPLFNAFIGVFVARFLSLGPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYISTTLGLTFPFNIVLGIPIYM
SLVNTIIPLSSL

Specific function: Unknown

COG id: COG3329

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35679; Mature: 35679

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEINPILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECC
GFTNQVLPTLSAAILMSLLIPLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHH
SQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKSRKMHLSAILHESLLNGSVYL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
LLSSLIVGFLTASSNPSGIEKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI
HHHHHHHHHHHCCCCCCCCHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCHHHCCCHHHH
GFAIFMPLFNAFIGVFVARFLSLGPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCEEE
STTLGLTFPFNIVLGIPIYMSLVNTIIPLSSL
EEEECCEEHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEINPILQNVLAPPVLFFLIGAISVLFKSDLEIPAPLPKLFSLYLLLAIGFKGGIEIQKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECC
GFTNQVLPTLSAAILMSLLIPLIGFLILRFKFDVFNSAAIAAAYGSISAVTFISAESFLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHH
SQKIAFDGFMVGALALMESPAIIVGLLLVKFAAPKNRPKSRKMHLSAILHESLLNGSVYL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
LLSSLIVGFLTASSNPSGIEKMEPFTGQLFYGAECFFLLDMGIVAAQRLPRLKNAGSFLI
HHHHHHHHHHHCCCCCCCCHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCHHHCCCHHHH
GFAIFMPLFNAFIGVFVARFLSLGPGNALLFVVLCASASYLAVPAAMRMTVPEAKSSYYI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCEEE
STTLGLTFPFNIVLGIPIYMSLVNTIIPLSSL
EEEECCEEHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA