| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967740
Identifier: 123967740
GI number: 123967740
Start: 186204
End: 186929
Strand: Direct
Name: 123967740
Synonym: A9601_02031
Alternate gene names: NA
Gene position: 186204-186929 (Clockwise)
Preceding gene: 123967739
Following gene: 123967745
Centisome position: 11.15
GC content: 29.48
Gene sequence:
>726_bases ATGATTTCTCAAATTAAAAACTTTTTATTTTTGATACTAGTTAGCTCTTTTTTACCTACCTCATTATTGGCAAGGAACTT AGGAATAAAAAGTTTGGGACATAGTAGTTTTTTAATTACTAGTGCAGATAAATCTATTCTTATAAATCCCTTTAAAGCAA TAGGTTGTGCAAGTAATTTAAAGGAGCCAAAAGAAGTCAACGTAGATTTTATTTTGGCTAGTTCTAGGCTTCCAGATGAA GGATATAACCCTAATGATCAATTAATGTTCGTTGAGCCAGGAATCTATCAATTTGAGGATATTTTATTAAATGGAATTTC TGTACCACATGACAGAGTAGATGGAAGAAGATTTGGGATGGCAACTGTTTGGAGTTGGGAGCAGAATGATCTTAAAATTG TTCATATGGGAGGAGCTGCTGGTGATATTGATATAAACAGTCAAATTATTTTGTCTGGTCCAGATATATTGTTTATTTCA ATTGGAGGAGGAATAAAATCTTACAATGGTAAAGAAGCCTCAAAAATAGTTAAGCTTCTAAAACCTAATGTAGTTATTCC TGTTCACTTTGAACGCGGCAAAAAAATTAATAAAGAATGTGATTTCTCAAATTCTGATTTATTTATCGAAAATATGAAAG ATTTTAAAGTAAAATATGTTGGAAAAAATTTTCAAATAAAACCTAAAAGAATCGATCAAAATACAATTTATATTTTCAGT AATTAA
Upstream 100 bases:
>100_bases CAGTTCCATCCTGAAAGTGTGTTGACGCAATTTGGTCATAAATTAATTAGTAATTTTCTAAAAATGGCTGAAAAAAAGTA AAATAAAAAAAAATAATATT
Downstream 100 bases:
>100_bases TTTTTTAAATCTAATATCTTGTAATTGTCCCAGAAAAAAATCATTTGTTCTTTAGTTCCAATACTAACCCTTATAGAATT ACTGATATCTTTTTTGTTTT
Product: Zn-dependent hydrolase
Products: NA
Alternate protein names: Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Hydrolase; Hydrolase Metallo-Beta-Lactamase Family Protein; Zn-Dependent Hydrolases Of Beta-Lactamase Fold; Zn-Dependent Hydrolase Of Beta-Lactamase Fold; Inactivated Zn-Dependent Hydrolase Of Beta-Lactamase Fold
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MISQIKNFLFLILVSSFLPTSLLARNLGIKSLGHSSFLITSADKSILINPFKAIGCASNLKEPKEVNVDFILASSRLPDE GYNPNDQLMFVEPGIYQFEDILLNGISVPHDRVDGRRFGMATVWSWEQNDLKIVHMGGAAGDIDINSQIILSGPDILFIS IGGGIKSYNGKEASKIVKLLKPNVVIPVHFERGKKINKECDFSNSDLFIENMKDFKVKYVGKNFQIKPKRIDQNTIYIFS N
Sequences:
>Translated_241_residues MISQIKNFLFLILVSSFLPTSLLARNLGIKSLGHSSFLITSADKSILINPFKAIGCASNLKEPKEVNVDFILASSRLPDE GYNPNDQLMFVEPGIYQFEDILLNGISVPHDRVDGRRFGMATVWSWEQNDLKIVHMGGAAGDIDINSQIILSGPDILFIS IGGGIKSYNGKEASKIVKLLKPNVVIPVHFERGKKINKECDFSNSDLFIENMKDFKVKYVGKNFQIKPKRIDQNTIYIFS N >Mature_241_residues MISQIKNFLFLILVSSFLPTSLLARNLGIKSLGHSSFLITSADKSILINPFKAIGCASNLKEPKEVNVDFILASSRLPDE GYNPNDQLMFVEPGIYQFEDILLNGISVPHDRVDGRRFGMATVWSWEQNDLKIVHMGGAAGDIDINSQIILSGPDILFIS IGGGIKSYNGKEASKIVKLLKPNVVIPVHFERGKKINKECDFSNSDLFIENMKDFKVKYVGKNFQIKPKRIDQNTIYIFS N
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26940; Mature: 26940
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISQIKNFLFLILVSSFLPTSLLARNLGIKSLGHSSFLITSADKSILINPFKAIGCASNL CHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEECCCEEEECCHHHHCCHHCC KEPKEVNVDFILASSRLPDEGYNPNDQLMFVEPGIYQFEDILLNGISVPHDRVDGRRFGM CCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCEECE ATVWSWEQNDLKIVHMGGAAGDIDINSQIILSGPDILFISIGGGIKSYNGKEASKIVKLL EEEEEECCCCEEEEEECCCCCCEECCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHH KPNVVIPVHFERGKKINKECDFSNSDLFIENMKDFKVKYVGKNFQIKPKRIDQNTIYIFS CCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCEEECCEECCCCEEEEEE N C >Mature Secondary Structure MISQIKNFLFLILVSSFLPTSLLARNLGIKSLGHSSFLITSADKSILINPFKAIGCASNL CHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEECCCEEEECCHHHHCCHHCC KEPKEVNVDFILASSRLPDEGYNPNDQLMFVEPGIYQFEDILLNGISVPHDRVDGRRFGM CCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCEECE ATVWSWEQNDLKIVHMGGAAGDIDINSQIILSGPDILFISIGGGIKSYNGKEASKIVKLL EEEEEECCCCEEEEEECCCCCCEECCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHH KPNVVIPVHFERGKKINKECDFSNSDLFIENMKDFKVKYVGKNFQIKPKRIDQNTIYIFS CCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCEEECCEECCCCEEEEEE N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA