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The map label for this gene is 123967696

Identifier: 123967696

GI number: 123967696

Start: 148883

End: 149302

Strand: Direct

Name: 123967696

Synonym: A9601_01591

Alternate gene names: NA

Gene position: 148883-149302 (Clockwise)

Preceding gene: 123967695

Following gene: 123967699

Centisome position: 8.92

GC content: 30.95

Gene sequence:

>420_bases
ATGAGTATTCGCATTTACATTGGTAACTTACCACAAGGATTTAATCCAAAAGAATTTGATACACTTTTAAAGTCAGTTTC
TGATTCGATTAGATTTAAAGCAGTTTTAGATAAGGAAACTAAGGAATGCAGGGGTTTTGGTTTTGCGACTTCTAATAATG
AAGATAATGCTAATTTATTAATTCAAAAGTTAAATGGTTTTGAATTTAATGGTTCTAAATTAAGAGTAGAGCTATCAGAA
AAGAAAGATTCTGCTTCAAATAAAAGAAATAGTGGAAAATTAAATAAGAATAAGAAGCGGAAAGACTTTAAGAAAATTGT
TCACAGTGATGCACCTAACTTAGAAGCTCCTGATCCAAGATGGGCTGGAGAACTATCTAAATTAAAAGATTTGTTGGCTA
ATCAGAAGACTCCTGCTTAG

Upstream 100 bases:

>100_bases
GCAAAGCGATGGATTGAACAAAATGCGCCAAAATGTGATTAAATACACATAGCTTAGTTTTGTTTAGAAGTTCAGACTTC
AAAATCATTTTTAAAAATTT

Downstream 100 bases:

>100_bases
TCATCTAATTCGAGAAATTAAAAAAGATATAGGAATTTCAAAAGCTTTTACTGAATTTTTTACATAAGCTCTATTATTAA
AGACATCATAGTCTAGCCTT

Product: RNA recognition motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSIRIYIGNLPQGFNPKEFDTLLKSVSDSIRFKAVLDKETKECRGFGFATSNNEDNANLLIQKLNGFEFNGSKLRVELSE
KKDSASNKRNSGKLNKNKKRKDFKKIVHSDAPNLEAPDPRWAGELSKLKDLLANQKTPA

Sequences:

>Translated_139_residues
MSIRIYIGNLPQGFNPKEFDTLLKSVSDSIRFKAVLDKETKECRGFGFATSNNEDNANLLIQKLNGFEFNGSKLRVELSE
KKDSASNKRNSGKLNKNKKRKDFKKIVHSDAPNLEAPDPRWAGELSKLKDLLANQKTPA
>Mature_138_residues
SIRIYIGNLPQGFNPKEFDTLLKSVSDSIRFKAVLDKETKECRGFGFATSNNEDNANLLIQKLNGFEFNGSKLRVELSEK
KDSASNKRNSGKLNKNKKRKDFKKIVHSDAPNLEAPDPRWAGELSKLKDLLANQKTPA

Specific function: Unknown

COG id: COG0724

COG function: function code R; RNA-binding proteins (RRM domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15654; Mature: 15523

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS50102 RRM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRIYIGNLPQGFNPKEFDTLLKSVSDSIRFKAVLDKETKECRGFGFATSNNEDNANLL
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHEE
IQKLNGFEFNGSKLRVELSEKKDSASNKRNSGKLNKNKKRKDFKKIVHSDAPNLEAPDPR
EEECCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCH
WAGELSKLKDLLANQKTPA
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SIRIYIGNLPQGFNPKEFDTLLKSVSDSIRFKAVLDKETKECRGFGFATSNNEDNANLL
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHEE
IQKLNGFEFNGSKLRVELSEKKDSASNKRNSGKLNKNKKRKDFKKIVHSDAPNLEAPDPR
EEECCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCH
WAGELSKLKDLLANQKTPA
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA