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The map label for this gene is dnaJ [H]

Identifier: 123967677

GI number: 123967677

Start: 131138

End: 131845

Strand: Reverse

Name: dnaJ [H]

Synonym: A9601_01401

Alternate gene names: 123967677

Gene position: 131845-131138 (Counterclockwise)

Preceding gene: 123967678

Following gene: 123967675

Centisome position: 7.9

GC content: 27.68

Gene sequence:

>708_bases
ATGGTTATCTTTAATGCAAAATTTATAAAAATGGAAAAAAATTTATATGAAGAATTAGGTCTCAAAAACAATGCAACCAG
AAGTGAAATTAAATCTTCATATCGCTCTTTAGTTAAGCAACATCATCCTGATGCAGGCGGAAAGAAAGAACGATTTCTTG
CAATACAAAATGCCTGGGAAACTCTAAATGACCCTATCAAAAAGCAACAATACGATAGCAGTTTTTTCTCTTCCAGTTCA
TCATTTGATTCATTTAATGAAAATTGGGAAGAGAAATTTAATTCAAAAAAATATAATTCTTCAATTAAGGACAAAGAAGT
TGAAACATGGATTAAAGAGATTTATAGTCCGATAAATAGATTAATTAGTCAAATAATTAAACCTTTGAATAACGAAATAA
AAGAACTATCTGCGGATCCATATGATGACCAACTTATGGAAAATTTTTGCAGGTACATAATTCTTTCAAAAAATAAAATA
GAAAAAGTTGAAAAAATTTATAACAAAAAAATAGTTCCAAAGTCTATTACAGCTTTAGGCCTTAATCTTTATCATTGTTT
TTCACAAGTTAAAGATGCGCTATCAGAATTTGATAGATATACACAAGGATACGTAGATAATTACTTATTTGATGGCAAAG
AAATGATCAAAGAAGCAAAAAGAATCCAATCAAAGATGTCTACAGAGAAAAAAAATAAAAACTTTTAG

Upstream 100 bases:

>100_bases
CTAATGAAAAAAAGATTGATAGTTATTCTTCCAAGTTTTGGAGAAAGATATTTATCAACAGCAATGTTTGAATCTAATAC
CTCAATTCAAGCCAGAAAAG

Downstream 100 bases:

>100_bases
ATATAAAAATTTTAATGAGTATATTCTTTAAGTTGATCTAATTTCAACCAAACATCTGGAACAGGTCTCCGCCATCGAAC
CTGAGCATATTCGTCTTTAA

Product: putative heat shock protein DnaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MVIFNAKFIKMEKNLYEELGLKNNATRSEIKSSYRSLVKQHHPDAGGKKERFLAIQNAWETLNDPIKKQQYDSSFFSSSS
SFDSFNENWEEKFNSKKYNSSIKDKEVETWIKEIYSPINRLISQIIKPLNNEIKELSADPYDDQLMENFCRYIILSKNKI
EKVEKIYNKKIVPKSITALGLNLYHCFSQVKDALSEFDRYTQGYVDNYLFDGKEMIKEAKRIQSKMSTEKKNKNF

Sequences:

>Translated_235_residues
MVIFNAKFIKMEKNLYEELGLKNNATRSEIKSSYRSLVKQHHPDAGGKKERFLAIQNAWETLNDPIKKQQYDSSFFSSSS
SFDSFNENWEEKFNSKKYNSSIKDKEVETWIKEIYSPINRLISQIIKPLNNEIKELSADPYDDQLMENFCRYIILSKNKI
EKVEKIYNKKIVPKSITALGLNLYHCFSQVKDALSEFDRYTQGYVDNYLFDGKEMIKEAKRIQSKMSTEKKNKNF
>Mature_235_residues
MVIFNAKFIKMEKNLYEELGLKNNATRSEIKSSYRSLVKQHHPDAGGKKERFLAIQNAWETLNDPIKKQQYDSSFFSSSS
SFDSFNENWEEKFNSKKYNSSIKDKEVETWIKEIYSPINRLISQIIKPLNNEIKELSADPYDDQLMENFCRYIILSKNKI
EKVEKIYNKKIVPKSITALGLNLYHCFSQVKDALSEFDRYTQGYVDNYLFDGKEMIKEAKRIQSKMSTEKKNKNF

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 27715; Mature: 27715

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIFNAKFIKMEKNLYEELGLKNNATRSEIKSSYRSLVKQHHPDAGGKKERFLAIQNAWE
CEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
TLNDPIKKQQYDSSFFSSSSSFDSFNENWEEKFNSKKYNSSIKDKEVETWIKEIYSPINR
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHH
LISQIIKPLNNEIKELSADPYDDQLMENFCRYIILSKNKIEKVEKIYNKKIVPKSITALG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH
LNLYHCFSQVKDALSEFDRYTQGYVDNYLFDGKEMIKEAKRIQSKMSTEKKNKNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVIFNAKFIKMEKNLYEELGLKNNATRSEIKSSYRSLVKQHHPDAGGKKERFLAIQNAWE
CEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
TLNDPIKKQQYDSSFFSSSSSFDSFNENWEEKFNSKKYNSSIKDKEVETWIKEIYSPINR
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHH
LISQIIKPLNNEIKELSADPYDDQLMENFCRYIILSKNKIEKVEKIYNKKIVPKSITALG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH
LNLYHCFSQVKDALSEFDRYTQGYVDNYLFDGKEMIKEAKRIQSKMSTEKKNKNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA