| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967658
Identifier: 123967658
GI number: 123967658
Start: 119093
End: 120247
Strand: Reverse
Name: 123967658
Synonym: A9601_01211
Alternate gene names: NA
Gene position: 120247-119093 (Counterclockwise)
Preceding gene: 123967659
Following gene: 123967657
Centisome position: 7.2
GC content: 28.31
Gene sequence:
>1155_bases ATGAACCAAAAAATACATAAAGTTGAAGTCAAATTATCAATTAAAGAAATCTCCAAGGAGATATGGAATGAATTAGCAAA TGAAATCAATAATCCATTTTATGAATGGACTTGGCTTAAAAACCTTGAAATATCAAAAAGTGTTTCAAGAGAAACTGGTT GGCAGCCTCTATATTTTGTTGCTTATAAGAATGAAGAAATATTAGGTATCGCTCCACTTTTCTTAAAAAGTCATAGCTAT GGAGAATTCATTTTTGATCAATCATTTGCACGATTGGCTCAAGAGCTTAATTTAAATTATTACCCTAAATTAATTGGAAT GAGCCCTTATAGTCCTGTAAATGGATATCAATTTCTTTATAAAAAAAATAAAGATAAGAAAGAAATTACAAATTTACTTA TAAAAAATATAGAAAGCTTTGCGATTACAAACAAAATTTTAAGTTGTAATTTTTTATATATTGATGAAAGCTGGGGCAAC CATCTTAAATCTTTGGGATACTATGAATGGATAAATTCCAGCAGTGAATGGAGAAGTAATGGAGAAAAAACGTTTGATGA TTTTCTTTCTAGATTTAATTCTAATCAGAGAAAAAATATCAAAAAAGAGAGGAAATCAATTACTAAACAAGATATTAAAA TAAAAATTTTTAATAAAGATGATATCAACCAAGAAATCCTCAAAAAAATGCATAATTTTTATGAACAGCATTGCTCGAGG TGGGGAGTTTGGGGAAGTAAATATCTAACATCTACATTTTTCGAAAAAATTGTTGATAATAAAAAAAATCTTTTACTTTT TAGCGCATCAAAAAATAATTCAAATGATATTTTTGCTATGTCGATGTGCGTTAAAAATAAAAACAACTTATGGGGTAGAT ATTGGGGTAGTGAAGAAGACATATCTAATTTACATTTTGAATTATGTTACTACCAGCCAATTGAATGGGCAATAAAAAAT AGTATCTATTTTTTTGATCCTGGGGCAGGTGGTAAACATAAAAGGCGGAGGGGGTTTTTTGCAAAAAGCACCATTAGCTT GCATAAGTGGTTTGACAAAAATATGGAAAATATAATTTATCCTTGGCTAAATGAAGTTAATAAACAAACCGAGACCGAAA TTGAATTTGAGAATGATTCTATACCCTTTAAATAA
Upstream 100 bases:
>100_bases TTAATCTCAAAAGACTATGGGAAATAAAATCAATTAAAAATTTAATGAATAATGAAATCCATGTTCATTACAAAAAAATT TGAAATAGATTCAATAATAA
Downstream 100 bases:
>100_bases AAAATTATTTGGCTTTATGGAAGATTATATTAGTAATATAGTTTTTATTAACTTCTAAGGATGGATTCTAGTAAAAGTTT AGATGAAAAAATCAAGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MNQKIHKVEVKLSIKEISKEIWNELANEINNPFYEWTWLKNLEISKSVSRETGWQPLYFVAYKNEEILGIAPLFLKSHSY GEFIFDQSFARLAQELNLNYYPKLIGMSPYSPVNGYQFLYKKNKDKKEITNLLIKNIESFAITNKILSCNFLYIDESWGN HLKSLGYYEWINSSSEWRSNGEKTFDDFLSRFNSNQRKNIKKERKSITKQDIKIKIFNKDDINQEILKKMHNFYEQHCSR WGVWGSKYLTSTFFEKIVDNKKNLLLFSASKNNSNDIFAMSMCVKNKNNLWGRYWGSEEDISNLHFELCYYQPIEWAIKN SIYFFDPGAGGKHKRRRGFFAKSTISLHKWFDKNMENIIYPWLNEVNKQTETEIEFENDSIPFK
Sequences:
>Translated_384_residues MNQKIHKVEVKLSIKEISKEIWNELANEINNPFYEWTWLKNLEISKSVSRETGWQPLYFVAYKNEEILGIAPLFLKSHSY GEFIFDQSFARLAQELNLNYYPKLIGMSPYSPVNGYQFLYKKNKDKKEITNLLIKNIESFAITNKILSCNFLYIDESWGN HLKSLGYYEWINSSSEWRSNGEKTFDDFLSRFNSNQRKNIKKERKSITKQDIKIKIFNKDDINQEILKKMHNFYEQHCSR WGVWGSKYLTSTFFEKIVDNKKNLLLFSASKNNSNDIFAMSMCVKNKNNLWGRYWGSEEDISNLHFELCYYQPIEWAIKN SIYFFDPGAGGKHKRRRGFFAKSTISLHKWFDKNMENIIYPWLNEVNKQTETEIEFENDSIPFK >Mature_384_residues MNQKIHKVEVKLSIKEISKEIWNELANEINNPFYEWTWLKNLEISKSVSRETGWQPLYFVAYKNEEILGIAPLFLKSHSY GEFIFDQSFARLAQELNLNYYPKLIGMSPYSPVNGYQFLYKKNKDKKEITNLLIKNIESFAITNKILSCNFLYIDESWGN HLKSLGYYEWINSSSEWRSNGEKTFDDFLSRFNSNQRKNIKKERKSITKQDIKIKIFNKDDINQEILKKMHNFYEQHCSR WGVWGSKYLTSTFFEKIVDNKKNLLLFSASKNNSNDIFAMSMCVKNKNNLWGRYWGSEEDISNLHFELCYYQPIEWAIKN SIYFFDPGAGGKHKRRRGFFAKSTISLHKWFDKNMENIIYPWLNEVNKQTETEIEFENDSIPFK
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45795; Mature: 45795
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKIHKVEVKLSIKEISKEIWNELANEINNPFYEWTWLKNLEISKSVSRETGWQPLYFV CCCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHCCCCCEEEE AYKNEEILGIAPLFLKSHSYGEFIFDQSFARLAQELNLNYYPKLIGMSPYSPVNGYQFLY EECCCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHEE KKNKDKKEITNLLIKNIESFAITNKILSCNFLYIDESWGNHLKSLGYYEWINSSSEWRSN ECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHCCHHHHHCCCHHHHCC GEKTFDDFLSRFNSNQRKNIKKERKSITKQDIKIKIFNKDDINQEILKKMHNFYEQHCSR CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH WGVWGSKYLTSTFFEKIVDNKKNLLLFSASKNNSNDIFAMSMCVKNKNNLWGRYWGSEED CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCCCC ISNLHFELCYYQPIEWAIKNSIYFFDPGAGGKHKRRRGFFAKSTISLHKWFDKNMENIIY CCCEEEEEEEECCHHHHHHCCEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCHHHEEH PWLNEVNKQTETEIEFENDSIPFK HHHHHHCCCCCCEEEECCCCCCCC >Mature Secondary Structure MNQKIHKVEVKLSIKEISKEIWNELANEINNPFYEWTWLKNLEISKSVSRETGWQPLYFV CCCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHCCCCCEEEE AYKNEEILGIAPLFLKSHSYGEFIFDQSFARLAQELNLNYYPKLIGMSPYSPVNGYQFLY EECCCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHEE KKNKDKKEITNLLIKNIESFAITNKILSCNFLYIDESWGNHLKSLGYYEWINSSSEWRSN ECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHCCHHHHHCCCHHHHCC GEKTFDDFLSRFNSNQRKNIKKERKSITKQDIKIKIFNKDDINQEILKKMHNFYEQHCSR CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH WGVWGSKYLTSTFFEKIVDNKKNLLLFSASKNNSNDIFAMSMCVKNKNNLWGRYWGSEED CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCCCC ISNLHFELCYYQPIEWAIKNSIYFFDPGAGGKHKRRRGFFAKSTISLHKWFDKNMENIIY CCCEEEEEEEECCHHHHHHCCEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCHHHEEH PWLNEVNKQTETEIEFENDSIPFK HHHHHHCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA