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The map label for this gene is degQ [C]

Identifier: 123967643

GI number: 123967643

Start: 106295

End: 107368

Strand: Reverse

Name: degQ [C]

Synonym: A9601_01061

Alternate gene names: 123967643

Gene position: 107368-106295 (Counterclockwise)

Preceding gene: 123967647

Following gene: 123967640

Centisome position: 6.43

GC content: 31.66

Gene sequence:

>1074_bases
ATGGGCATTAGACATCCTGCAAAAGTAATATCCCAAACATTAAGCAAGCCAAAAATTAATGAAGTTAATTTATATTCGAA
CAAATCTTTTATAACTAAAGCTGTAGAAAGAACCGGTGCAGCTGTGGTGACAATTGATACTCAAAGATATGTTAAAAAAA
GAAATTTTCCAAGAAATTCTCAACTATTTTTAGACCCATATTTTGAAAGATTTTTTGGATTAGATTTAAATAACGAAAAT
CGACCAAGGATAGAGCAAAACCAAGGCAGTGGATTTATATTTGCAGATGGACTTGTAATGACCAATGCTCATGTAGTGAA
TGGATCAGATAAGGTAATTGTTGGTTTAACCAATGGCAAAAAATTAAACGCTAAACTGATAGGTCAAGACTCTTTTACTG
ATTTAGCTGTGCTAAAGATTGAAGGGAAAGGGCCTTGGCCAAAAGCAAAATTGGGCGATTCTGCAAAGATTAAAGTTGGT
GATTGGGCTATAGCAGTTGGAAATCCATTTGGATTGGAAAACACAGTTACGCTTGGTATTATTAGTAATCTAAATAGAAA
CGTAAATCAATTAGGAATATATGATAAAAAACTTGAACTGATACAAACTGACGCTGCTATTAATCCTGGCAATTCTGGAG
GTCCACTGTTGAATAGCGATGGAGAAGTAATTGGTATTAATACCTTGATAAGATCAGGTCCAGGAGCCGGTTTGAGTTTC
GCAATCCCAATTAATAAAGCTAAAGAAATTGCCTATCAACTTTTAAACAATGGGAAAGTAATACATCCTATGATTGGAAT
TAGCCTAATAGAAGAAAGTGTTTCTGAGAGAAAAAATAATGTCGTAAAAGTTGGATATGTAGTACCGAACAGTCCAGCTG
AAAAAAGTGGAATCAAGATAGATGATATTTTAATTAAAATAGACAATAAAGATATTGAAACCGCATCAGACGTAATAGAA
CAAATTAGTAAAAATGGTATCAAAAAACAAGTAAATATATTATTAAAGCGTAAAAATAAATTTATTAAATTAAAAGTAAT
ACCAACTGATATTACTAATCTACAAAATAAATAA

Upstream 100 bases:

>100_bases
AATTACACTGATATGGTGTATTAAATCTCTCGAAGTACATAAAAAATCAAAATTGAAAAGAGACATCCAAAAGCTATTAA
TAATCGTCTCATTAATTACA

Downstream 100 bases:

>100_bases
AAAATTTAATTGTTATTCCGTTTAAGTATTTCCACACATCTAGAAATACATCTACCATCGCTTACATCACAGGAAGTAAT
GCATTCAAAATAACTTTCAA

Product: serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MGIRHPAKVISQTLSKPKINEVNLYSNKSFITKAVERTGAAVVTIDTQRYVKKRNFPRNSQLFLDPYFERFFGLDLNNEN
RPRIEQNQGSGFIFADGLVMTNAHVVNGSDKVIVGLTNGKKLNAKLIGQDSFTDLAVLKIEGKGPWPKAKLGDSAKIKVG
DWAIAVGNPFGLENTVTLGIISNLNRNVNQLGIYDKKLELIQTDAAINPGNSGGPLLNSDGEVIGINTLIRSGPGAGLSF
AIPINKAKEIAYQLLNNGKVIHPMIGISLIEESVSERKNNVVKVGYVVPNSPAEKSGIKIDDILIKIDNKDIETASDVIE
QISKNGIKKQVNILLKRKNKFIKLKVIPTDITNLQNK

Sequences:

>Translated_357_residues
MGIRHPAKVISQTLSKPKINEVNLYSNKSFITKAVERTGAAVVTIDTQRYVKKRNFPRNSQLFLDPYFERFFGLDLNNEN
RPRIEQNQGSGFIFADGLVMTNAHVVNGSDKVIVGLTNGKKLNAKLIGQDSFTDLAVLKIEGKGPWPKAKLGDSAKIKVG
DWAIAVGNPFGLENTVTLGIISNLNRNVNQLGIYDKKLELIQTDAAINPGNSGGPLLNSDGEVIGINTLIRSGPGAGLSF
AIPINKAKEIAYQLLNNGKVIHPMIGISLIEESVSERKNNVVKVGYVVPNSPAEKSGIKIDDILIKIDNKDIETASDVIE
QISKNGIKKQVNILLKRKNKFIKLKVIPTDITNLQNK
>Mature_356_residues
GIRHPAKVISQTLSKPKINEVNLYSNKSFITKAVERTGAAVVTIDTQRYVKKRNFPRNSQLFLDPYFERFFGLDLNNENR
PRIEQNQGSGFIFADGLVMTNAHVVNGSDKVIVGLTNGKKLNAKLIGQDSFTDLAVLKIEGKGPWPKAKLGDSAKIKVGD
WAIAVGNPFGLENTVTLGIISNLNRNVNQLGIYDKKLELIQTDAAINPGNSGGPLLNSDGEVIGINTLIRSGPGAGLSFA
IPINKAKEIAYQLLNNGKVIHPMIGISLIEESVSERKNNVVKVGYVVPNSPAEKSGIKIDDILIKIDNKDIETASDVIEQ
ISKNGIKKQVNILLKRKNKFIKLKVIPTDITNLQNK

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=349, Percent_Identity=36.3896848137536, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI7019477, Length=343, Percent_Identity=34.1107871720117, Blast_Score=161, Evalue=8e-40,
Organism=Homo sapiens, GI22129776, Length=319, Percent_Identity=35.1097178683386, Blast_Score=155, Evalue=6e-38,
Organism=Homo sapiens, GI24308541, Length=281, Percent_Identity=35.9430604982206, Blast_Score=152, Evalue=6e-37,
Organism=Escherichia coli, GI1789629, Length=290, Percent_Identity=38.9655172413793, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1789630, Length=287, Percent_Identity=37.2822299651568, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1786356, Length=263, Percent_Identity=38.4030418250951, Blast_Score=155, Evalue=4e-39,
Organism=Drosophila melanogaster, GI24646839, Length=309, Percent_Identity=34.6278317152104, Blast_Score=149, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 39027; Mature: 38895

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIRHPAKVISQTLSKPKINEVNLYSNKSFITKAVERTGAAVVTIDTQRYVKKRNFPRNS
CCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCC
QLFLDPYFERFFGLDLNNENRPRIEQNQGSGFIFADGLVMTNAHVVNGSDKVIVGLTNGK
EEEECHHHHHHCCCCCCCCCCCCEECCCCCEEEEECCEEEECEEEECCCCEEEEEECCCC
KLNAKLIGQDSFTDLAVLKIEGKGPWPKAKLGDSAKIKVGDWAIAVGNPFGLENTVTLGI
EEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCEEEEEE
ISNLNRNVNQLGIYDKKLELIQTDAAINPGNSGGPLLNSDGEVIGINTLIRSGPGAGLSF
ECCCCCCHHHCCCCHHHEEEEEECCCCCCCCCCCCEECCCCCEEEEEHHHHCCCCCCEEE
AIPINKAKEIAYQLLNNGKVIHPMIGISLIEESVSERKNNVVKVGYVVPNSPAEKSGIKI
EEECCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHCCCEE
DDILIKIDNKDIETASDVIEQISKNGIKKQVNILLKRKNKFIKLKVIPTDITNLQNK
EEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHEECCCCEEEEEEECCCHHCCCCC
>Mature Secondary Structure 
GIRHPAKVISQTLSKPKINEVNLYSNKSFITKAVERTGAAVVTIDTQRYVKKRNFPRNS
CCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCC
QLFLDPYFERFFGLDLNNENRPRIEQNQGSGFIFADGLVMTNAHVVNGSDKVIVGLTNGK
EEEECHHHHHHCCCCCCCCCCCCEECCCCCEEEEECCEEEECEEEECCCCEEEEEECCCC
KLNAKLIGQDSFTDLAVLKIEGKGPWPKAKLGDSAKIKVGDWAIAVGNPFGLENTVTLGI
EEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCEEEEEE
ISNLNRNVNQLGIYDKKLELIQTDAAINPGNSGGPLLNSDGEVIGINTLIRSGPGAGLSF
ECCCCCCHHHCCCCHHHEEEEEECCCCCCCCCCCCEECCCCCEEEEEHHHHCCCCCCEEE
AIPINKAKEIAYQLLNNGKVIHPMIGISLIEESVSERKNNVVKVGYVVPNSPAEKSGIKI
EEECCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHCCCEE
DDILIKIDNKDIETASDVIEQISKNGIKKQVNILLKRKNKFIKLKVIPTDITNLQNK
EEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHEECCCCEEEEEEECCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA