| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967624
Identifier: 123967624
GI number: 123967624
Start: 91049
End: 92149
Strand: Direct
Name: 123967624
Synonym: A9601_00871
Alternate gene names: NA
Gene position: 91049-92149 (Clockwise)
Preceding gene: 123967623
Following gene: 123967625
Centisome position: 5.45
GC content: 35.42
Gene sequence:
>1101_bases GTGGCTGATGGGATCATGAATAAAGATCAATTACTCTCACTAACCCTCAGACAATTACGTCAAGAAGCAAGTAAATTATC GGTTCCGCTGTATAGTCGCAAAACAAAAGCTGTTTTAGTCGATTTAATACTTAAATATCAAGAAAAATCTACAAAAAAAA CCTACATTGTAGCTTCTCAGTCAAAACCTGAAGAAACTGCTGAGTCCAATTCTTTCAACAGTAGTGAAGAAGTTAAAACA AATGTAGTTTTCCTACCGCGAGATCCAGATTGGGCTTATGTTTTCTGGCAAATTTCTGATGCAGATAGAGAAAAAGCACA ATCTTTAGGAGCCAATAAATTATGTTTACGATTATTTGATGCATCTGGTTCTGAAGGAAGCAACTTGAATCAAGGAACAC TTAGGGAGATAGCAGTTGATAGTTACAGTACTGAGTGGTACTTGCCGATCCCACTTGCAGATAGAGATTATAAAGTTGAA TTAGGTTACAAATATGGTTTTAACTGGATGTCATTGGCATTTTCTTCAATAAGCCATGTTCCTGGGTCTCATCCCTCTGA GCAAATTCTTGATAAATTTGTGCCTTTTAATTTAGATTCTACTTCTGAGTCAATACCAGATATTTCTAATTCTGTTGTTT CAGAACAAAATGGTATGCATGAAAGGTTATACCAAGCAGCAACTAATATTCCTCTCAGAAGAAAAGTTGGTTCTGAAGAA TTTATGGAAAACTTAAATTCAACAAACCTTAACGATAATCTTACAGACTCAGGTGCTGGTAAATGGTCATCAGGTTTAAA TGATTCTGGAAGCGGAATTGTTAAAAATAGATCTTTTTGGCTCGTTGCTGATGCTGAATTAATTGTTTATGGAGCTACAG AGCCTTCTGCAAAACTAACAATAGGTGGAGAAGATGTACCTCTTGCTGCAGATGGTACTTTTAGAATTCAAGTTCCATTT AGAGACGGGACTCAAAAATATGATATTAAAGCTGTTGATGTGTCTGGTGAGCAAGAAAAAAGTATATCAATGAAATTTGA TAGATCTACTCCACTTGACGATACTAATGAAAAAGATAATGCTGAGACTGAATGGTTTTGA
Upstream 100 bases:
>100_bases ATTCTTTAGTAGTCAGAGGATCCTGACGACAGGCCAAAAAGACACACAATTCCTAAAAAAAAAGAACATACTGATCCCAA ACAAAAACGGAGAATTTAAA
Downstream 100 bases:
>100_bases TAAATTAAATTAATGCTGAAAAAAATTGTAGCTTTTACCCCATTGTTTGGAGCATTAACTTTTCCATTAATAGTTCCAAT TACAATTTCTAAATTTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MADGIMNKDQLLSLTLRQLRQEASKLSVPLYSRKTKAVLVDLILKYQEKSTKKTYIVASQSKPEETAESNSFNSSEEVKT NVVFLPRDPDWAYVFWQISDADREKAQSLGANKLCLRLFDASGSEGSNLNQGTLREIAVDSYSTEWYLPIPLADRDYKVE LGYKYGFNWMSLAFSSISHVPGSHPSEQILDKFVPFNLDSTSESIPDISNSVVSEQNGMHERLYQAATNIPLRRKVGSEE FMENLNSTNLNDNLTDSGAGKWSSGLNDSGSGIVKNRSFWLVADAELIVYGATEPSAKLTIGGEDVPLAADGTFRIQVPF RDGTQKYDIKAVDVSGEQEKSISMKFDRSTPLDDTNEKDNAETEWF
Sequences:
>Translated_366_residues MADGIMNKDQLLSLTLRQLRQEASKLSVPLYSRKTKAVLVDLILKYQEKSTKKTYIVASQSKPEETAESNSFNSSEEVKT NVVFLPRDPDWAYVFWQISDADREKAQSLGANKLCLRLFDASGSEGSNLNQGTLREIAVDSYSTEWYLPIPLADRDYKVE LGYKYGFNWMSLAFSSISHVPGSHPSEQILDKFVPFNLDSTSESIPDISNSVVSEQNGMHERLYQAATNIPLRRKVGSEE FMENLNSTNLNDNLTDSGAGKWSSGLNDSGSGIVKNRSFWLVADAELIVYGATEPSAKLTIGGEDVPLAADGTFRIQVPF RDGTQKYDIKAVDVSGEQEKSISMKFDRSTPLDDTNEKDNAETEWF >Mature_365_residues ADGIMNKDQLLSLTLRQLRQEASKLSVPLYSRKTKAVLVDLILKYQEKSTKKTYIVASQSKPEETAESNSFNSSEEVKTN VVFLPRDPDWAYVFWQISDADREKAQSLGANKLCLRLFDASGSEGSNLNQGTLREIAVDSYSTEWYLPIPLADRDYKVEL GYKYGFNWMSLAFSSISHVPGSHPSEQILDKFVPFNLDSTSESIPDISNSVVSEQNGMHERLYQAATNIPLRRKVGSEEF MENLNSTNLNDNLTDSGAGKWSSGLNDSGSGIVKNRSFWLVADAELIVYGATEPSAKLTIGGEDVPLAADGTFRIQVPFR DGTQKYDIKAVDVSGEQEKSISMKFDRSTPLDDTNEKDNAETEWF
Specific function: Unknown
COG id: COG3330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40823; Mature: 40691
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGIMNKDQLLSLTLRQLRQEASKLSVPLYSRKTKAVLVDLILKYQEKSTKKTYIVASQ CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC SKPEETAESNSFNSSEEVKTNVVFLPRDPDWAYVFWQISDADREKAQSLGANKLCLRLFD CCCCHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHCCCCEEEEEEEC ASGSEGSNLNQGTLREIAVDSYSTEWYLPIPLADRDYKVELGYKYGFNWMSLAFSSISHV CCCCCCCCCCCCHHHHHEECCCCCEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHCC PGSHPSEQILDKFVPFNLDSTSESIPDISNSVVSEQNGMHERLYQAATNIPLRRKVGSEE CCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCHHH FMENLNSTNLNDNLTDSGAGKWSSGLNDSGSGIVKNRSFWLVADAELIVYGATEPSAKLT HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCEEEEEECCCCCCEEE IGGEDVPLAADGTFRIQVPFRDGTQKYDIKAVDVSGEQEKSISMKFDRSTPLDDTNEKDN ECCCCCEEECCCEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCC AETEWF CCCCCC >Mature Secondary Structure ADGIMNKDQLLSLTLRQLRQEASKLSVPLYSRKTKAVLVDLILKYQEKSTKKTYIVASQ CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC SKPEETAESNSFNSSEEVKTNVVFLPRDPDWAYVFWQISDADREKAQSLGANKLCLRLFD CCCCHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHCCCCEEEEEEEC ASGSEGSNLNQGTLREIAVDSYSTEWYLPIPLADRDYKVELGYKYGFNWMSLAFSSISHV CCCCCCCCCCCCHHHHHEECCCCCEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHCC PGSHPSEQILDKFVPFNLDSTSESIPDISNSVVSEQNGMHERLYQAATNIPLRRKVGSEE CCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCHHH FMENLNSTNLNDNLTDSGAGKWSSGLNDSGSGIVKNRSFWLVADAELIVYGATEPSAKLT HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCEEEEEECCCCCCEEE IGGEDVPLAADGTFRIQVPFRDGTQKYDIKAVDVSGEQEKSISMKFDRSTPLDDTNEKDN ECCCCCEEECCCEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCC AETEWF CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA