| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123967607
Identifier: 123967607
GI number: 123967607
Start: 74367
End: 75422
Strand: Direct
Name: 123967607
Synonym: A9601_00701
Alternate gene names: NA
Gene position: 74367-75422 (Clockwise)
Preceding gene: 123967606
Following gene: 123967609
Centisome position: 4.45
GC content: 35.13
Gene sequence:
>1056_bases ATGAGCTTGTCTAACACATCTGCTAATAAGAATCTCCCTAACTCGGTTCCTAGTGAACGTTTATGGTTAAGGTCAGAATT AATGGGAACACAAGTGATAACTACTGATACTGGAAGACGGCTAGGCGTAGTTGGCGAAGTTGTTGTTGATATTGATAGAA GAGAGGTGGTCGCTTTGGGACTAAGAGATAATCCACTTACAAGATTTTTACCAGGTTTGCCAAAATGGATGCCTTTAGAA AGTATTAAGCAAGTTGGAGATGTCATATTAGTTGACTCCCTAGATTCTTTAAGTGAAAGTTTTTCTCCAGAAAGGTATGG GAAGGTAATTAATTGTCAAGTGATTACAGAATCTGGACAACTTCTGGGAAGAGTTCTTGGCTTTTCTTTTGATATTGAGA CTGGGGATTTGATATCTCTTGTTATGGGTGCTGTTGGTGTTCCGCTTTTAGGCGAGGGAGTTTTAAGTACTTGGGAAATA CCTGTTGAGGAAATTGTAAGTAGTGGTACTGATAGGATTATTGTTTATGAGGGTGCGGAAGAAAAACTGAAGCAACTAAG TAGTGGACTACTTGAGAAACTAGGAGTCGGGGGTTCTTCATGGGATGAAAGGGAAGTCAATGGATACTCAGCAAATCTTG TACCTGTTGAGAATCAGTTACTTTCAGGTTCTGAATCAGAACAGCAAAACAATTTGGTCGAGGAATATGAAGAAGTTGTT GAACAAGATGATTATGAAGATGATTATGAAGATGATTATGAAGATGAACTTGAATATATTGAAATAAAGGGTTCTGAAGC AGAACTAAATAATAGAAAAAAGCTATACATGGATAATGATGATTCTGATCAGATCCAGAATCAAAATATTGTTAATCAAA TAAATGAAAAAAATAATATTGATTTAAAGCAAAAAAAACAATCAACTACTAATTTAGCTTCGAAAAGACCAATTCAAAAT GCAACTGAAACTTTAGATATTGAACCACTAAACGAACAAAATTTAGTTCAAGATAATAAAAAATCAGAAAAGTTTGAAAT TGATGACCCCTGGTAA
Upstream 100 bases:
>100_bases TGCGCAAGCAAGAGGTGCTAATACTCAAGTTCTTGGGTTACCAAATGCTGCATAAACACACTTTTTTAAATTTATACGTC AGAATGATAAAAAGAAATTT
Downstream 100 bases:
>100_bases TTGTTAAAGTTTTTTTATTGAATTAAGAATTATAGAAGCAAGTTTTTTTGCAGCACCTTTATCGCCTCTTTCTTTGTGTA GATTATCCCTAATACTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSLSNTSANKNLPNSVPSERLWLRSELMGTQVITTDTGRRLGVVGEVVVDIDRREVVALGLRDNPLTRFLPGLPKWMPLE SIKQVGDVILVDSLDSLSESFSPERYGKVINCQVITESGQLLGRVLGFSFDIETGDLISLVMGAVGVPLLGEGVLSTWEI PVEEIVSSGTDRIIVYEGAEEKLKQLSSGLLEKLGVGGSSWDEREVNGYSANLVPVENQLLSGSESEQQNNLVEEYEEVV EQDDYEDDYEDDYEDELEYIEIKGSEAELNNRKKLYMDNDDSDQIQNQNIVNQINEKNNIDLKQKKQSTTNLASKRPIQN ATETLDIEPLNEQNLVQDNKKSEKFEIDDPW
Sequences:
>Translated_351_residues MSLSNTSANKNLPNSVPSERLWLRSELMGTQVITTDTGRRLGVVGEVVVDIDRREVVALGLRDNPLTRFLPGLPKWMPLE SIKQVGDVILVDSLDSLSESFSPERYGKVINCQVITESGQLLGRVLGFSFDIETGDLISLVMGAVGVPLLGEGVLSTWEI PVEEIVSSGTDRIIVYEGAEEKLKQLSSGLLEKLGVGGSSWDEREVNGYSANLVPVENQLLSGSESEQQNNLVEEYEEVV EQDDYEDDYEDDYEDELEYIEIKGSEAELNNRKKLYMDNDDSDQIQNQNIVNQINEKNNIDLKQKKQSTTNLASKRPIQN ATETLDIEPLNEQNLVQDNKKSEKFEIDDPW >Mature_350_residues SLSNTSANKNLPNSVPSERLWLRSELMGTQVITTDTGRRLGVVGEVVVDIDRREVVALGLRDNPLTRFLPGLPKWMPLES IKQVGDVILVDSLDSLSESFSPERYGKVINCQVITESGQLLGRVLGFSFDIETGDLISLVMGAVGVPLLGEGVLSTWEIP VEEIVSSGTDRIIVYEGAEEKLKQLSSGLLEKLGVGGSSWDEREVNGYSANLVPVENQLLSGSESEQQNNLVEEYEEVVE QDDYEDDYEDDYEDELEYIEIKGSEAELNNRKKLYMDNDDSDQIQNQNIVNQINEKNNIDLKQKKQSTTNLASKRPIQNA TETLDIEPLNEQNLVQDNKKSEKFEIDDPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39315; Mature: 39184
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSNTSANKNLPNSVPSERLWLRSELMGTQVITTDTGRRLGVVGEVVVDIDRREVVALG CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEECHHHHEEEECCCCEEEEEC LRDNPLTRFLPGLPKWMPLESIKQVGDVILVDSLDSLSESFSPERYGKVINCQVITESGQ CCCCCHHHHHCCCCCCCCHHHHHHHCCEEEEECHHHHHHHCCHHHHCCEEEEEEEECCHH LLGRVLGFSFDIETGDLISLVMGAVGVPLLGEGVLSTWEIPVEEIVSSGTDRIIVYEGAE HHHHHHCCEECCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHCCCCCEEEEECCHH EKLKQLSSGLLEKLGVGGSSWDEREVNGYSANLVPVENQLLSGSESEQQNNLVEEYEEVV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHH EQDDYEDDYEDDYEDELEYIEIKGSEAELNNRKKLYMDNDDSDQIQNQNIVNQINEKNNI HCCCCCCCCCCCCCCCCEEEEEECCHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCC DLKQKKQSTTNLASKRPIQNATETLDIEPLNEQNLVQDNKKSEKFEIDDPW CHHHHHHHHHHHHHCCCCCCHHHEECCCCCCCCHHHHCCCCCCCEECCCCC >Mature Secondary Structure SLSNTSANKNLPNSVPSERLWLRSELMGTQVITTDTGRRLGVVGEVVVDIDRREVVALG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEECHHHHEEEECCCCEEEEEC LRDNPLTRFLPGLPKWMPLESIKQVGDVILVDSLDSLSESFSPERYGKVINCQVITESGQ CCCCCHHHHHCCCCCCCCHHHHHHHCCEEEEECHHHHHHHCCHHHHCCEEEEEEEECCHH LLGRVLGFSFDIETGDLISLVMGAVGVPLLGEGVLSTWEIPVEEIVSSGTDRIIVYEGAE HHHHHHCCEECCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHCCCCCEEEEECCHH EKLKQLSSGLLEKLGVGGSSWDEREVNGYSANLVPVENQLLSGSESEQQNNLVEEYEEVV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHH EQDDYEDDYEDDYEDELEYIEIKGSEAELNNRKKLYMDNDDSDQIQNQNIVNQINEKNNI HCCCCCCCCCCCCCCCCEEEEEECCHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCC DLKQKKQSTTNLASKRPIQNATETLDIEPLNEQNLVQDNKKSEKFEIDDPW CHHHHHHHHHHHHHCCCCCCHHHEECCCCCCCCHHHHCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA