Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123967590

Identifier: 123967590

GI number: 123967590

Start: 60107

End: 60859

Strand: Reverse

Name: 123967590

Synonym: A9601_00531

Alternate gene names: NA

Gene position: 60859-60107 (Counterclockwise)

Preceding gene: 123967592

Following gene: 123967589

Centisome position: 3.64

GC content: 31.47

Gene sequence:

>753_bases
ATGAAAATTTACCCTTTAATAGTTTCTATTTTCTTTGCAACAACACCAACGATATTTAGCGATAAATCGAAAGCAAAAAG
TATTATTCCTGATACTAATAAATCAATAGAACTTAGCGCAGAAGGCGACAAGAAACGATACTTCTATGATGATCATAAAA
GTGCGATAGAAGATTATACAGAGTCATTAAAATTCAATTCAAAGAATACTTATGCATTATTTAGTAGAGCATATTCAAAG
AGTGAATTAAAGGATTATCAAGGTGCTGTAGAAGATCTAAATCAACTACTAGCAATAGATCCTACTAATGGACCTGCTTT
ATATAATCGCGCAAGAGCGAATGCAAATTTAAAAAGAAATATAAGTGCTATTAAAGATTATTCAAAAGCAATTTCCAAAG
AAATAGAACTTCAACATTCATACTTCAATAGAGGAATACTTAAAGAACTTATTGGGGATGCTAAAGGCGCATGTGATGAC
TGGGGAAAAGGAATTGAGAAGGGAAATAGAAATAAAAGAGCAAAAAATGTTTTTGCAGAGAATTGTTTACCAAGCAATTT
TGCAAGATTTGAACTAAAGACTAAAAATAATCTAATTATGAAAAGAGCAAGAGAAAGAAATCTTGCAGGCGATAGGCGAG
GCGCTTGTGAAGATTATCAATTAGCAAAAAGTAATGGATATGTAGCACCAAAAAAATATAAACTCTTCTATAAGGTCATT
ACAGACCCATACTGTTTCCTTAGAACCCTTTAA

Upstream 100 bases:

>100_bases
AACCAACATTTTTAGTTTTAATTAATAAGAGATAAGCCACATAGCATTATTCTGCATCTGCTCTAAATTAAATAAACAAG
ATCTTTATATTATTTGAAGT

Downstream 100 bases:

>100_bases
ATGGCAACCTTTGATGAGTTTTATTCATCATTAGATTCTGATCCAAGAATCAGAGGTAAGCAGTTTGAAAAATTTATAAA
GTGGTTCCTTAAAAATGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKIYPLIVSIFFATTPTIFSDKSKAKSIIPDTNKSIELSAEGDKKRYFYDDHKSAIEDYTESLKFNSKNTYALFSRAYSK
SELKDYQGAVEDLNQLLAIDPTNGPALYNRARANANLKRNISAIKDYSKAISKEIELQHSYFNRGILKELIGDAKGACDD
WGKGIEKGNRNKRAKNVFAENCLPSNFARFELKTKNNLIMKRARERNLAGDRRGACEDYQLAKSNGYVAPKKYKLFYKVI
TDPYCFLRTL

Sequences:

>Translated_250_residues
MKIYPLIVSIFFATTPTIFSDKSKAKSIIPDTNKSIELSAEGDKKRYFYDDHKSAIEDYTESLKFNSKNTYALFSRAYSK
SELKDYQGAVEDLNQLLAIDPTNGPALYNRARANANLKRNISAIKDYSKAISKEIELQHSYFNRGILKELIGDAKGACDD
WGKGIEKGNRNKRAKNVFAENCLPSNFARFELKTKNNLIMKRARERNLAGDRRGACEDYQLAKSNGYVAPKKYKLFYKVI
TDPYCFLRTL
>Mature_250_residues
MKIYPLIVSIFFATTPTIFSDKSKAKSIIPDTNKSIELSAEGDKKRYFYDDHKSAIEDYTESLKFNSKNTYALFSRAYSK
SELKDYQGAVEDLNQLLAIDPTNGPALYNRARANANLKRNISAIKDYSKAISKEIELQHSYFNRGILKELIGDAKGACDD
WGKGIEKGNRNKRAKNVFAENCLPSNFARFELKTKNNLIMKRARERNLAGDRRGACEDYQLAKSNGYVAPKKYKLFYKVI
TDPYCFLRTL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28540; Mature: 28540

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYPLIVSIFFATTPTIFSDKSKAKSIIPDTNKSIELSAEGDKKRYFYDDHKSAIEDYT
CCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCCEECHHHHHHHHHH
ESLKFNSKNTYALFSRAYSKSELKDYQGAVEDLNQLLAIDPTNGPALYNRARANANLKRN
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHCCCCHHHH
ISAIKDYSKAISKEIELQHSYFNRGILKELIGDAKGACDDWGKGIEKGNRNKRAKNVFAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHH
NCLPSNFARFELKTKNNLIMKRARERNLAGDRRGACEDYQLAKSNGYVAPKKYKLFYKVI
HCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHH
TDPYCFLRTL
CCCHHHHHCC
>Mature Secondary Structure
MKIYPLIVSIFFATTPTIFSDKSKAKSIIPDTNKSIELSAEGDKKRYFYDDHKSAIEDYT
CCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCCEECHHHHHHHHHH
ESLKFNSKNTYALFSRAYSKSELKDYQGAVEDLNQLLAIDPTNGPALYNRARANANLKRN
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHCCCCHHHH
ISAIKDYSKAISKEIELQHSYFNRGILKELIGDAKGACDDWGKGIEKGNRNKRAKNVFAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHH
NCLPSNFARFELKTKNNLIMKRARERNLAGDRRGACEDYQLAKSNGYVAPKKYKLFYKVI
HCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHH
TDPYCFLRTL
CCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA