| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967569
Identifier: 123967569
GI number: 123967569
Start: 31543
End: 32055
Strand: Reverse
Name: 123967569
Synonym: A9601_00321
Alternate gene names: NA
Gene position: 32055-31543 (Counterclockwise)
Preceding gene: 123967571
Following gene: 123967568
Centisome position: 1.92
GC content: 38.99
Gene sequence:
>513_bases ATGTCAAACGTAAATCTCATATATTACCTTCTTGCTGGCGGAATTTTTGGGGCTTTAGCTCTAAAAACAGGCATCCCTGC AGCTCCTCTTGCAGGTGCCTTAATAGGCGCAAGCATACTTAGCATTAGTGGCAAAGTCGATATTGCAGAGTGGCCAATAG GCACAAGAACAATTTTAGAAATCGGCATTGGAACAGTTATTGGTACATCATTAACCAAAGACTCATTAATGGATCTTCAA ACCTTATGGAGGCCTGCTATATTAATAACTTTTACTTTAGTTATTACAGGATTAGCAATTGGATTATGGACAAGCAGATT ACTTAATATCGATGTGATAACAACAATTCTTGGTGCGGCGCCAGGGGGTATTAGCGGTATGAGCCTTGTAGGGTCAGAGT ATGGGGTAGGAGCTGCAGTAGCTACACTACATGCAGTTAGATTAATTACTGTGCTTCTAATTCTTCCTTTAGTTGTGAAA TGCTTGAATATATTTGGAGTAATTAAATCTTAA
Upstream 100 bases:
>100_bases AAAAGGGGACATTACGAGAGGAAATCAAAAATATTATTTGACTATAAACTTAAGCAAATAAATTTTTTTCTAATATTATG TCCAAACATCACTAAAACTT
Downstream 100 bases:
>100_bases ATTTCTATAGACATATTCATAATAAAAGATATTTTTAAATAGAAGATAAATGGCTAATGCAAAGCTTAAAGAATAAAAAA TTAATATTAATATCGTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSNVNLIYYLLAGGIFGALALKTGIPAAPLAGALIGASILSISGKVDIAEWPIGTRTILEIGIGTVIGTSLTKDSLMDLQ TLWRPAILITFTLVITGLAIGLWTSRLLNIDVITTILGAAPGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLVVK CLNIFGVIKS
Sequences:
>Translated_170_residues MSNVNLIYYLLAGGIFGALALKTGIPAAPLAGALIGASILSISGKVDIAEWPIGTRTILEIGIGTVIGTSLTKDSLMDLQ TLWRPAILITFTLVITGLAIGLWTSRLLNIDVITTILGAAPGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLVVK CLNIFGVIKS >Mature_169_residues SNVNLIYYLLAGGIFGALALKTGIPAAPLAGALIGASILSISGKVDIAEWPIGTRTILEIGIGTVIGTSLTKDSLMDLQT LWRPAILITFTLVITGLAIGLWTSRLLNIDVITTILGAAPGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLVVKC LNIFGVIKS
Specific function: Unknown
COG id: COG3180
COG function: function code R; Putative ammonia monooxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17476; Mature: 17345
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVNLIYYLLAGGIFGALALKTGIPAAPLAGALIGASILSISGKVDIAEWPIGTRTILE CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH IGIGTVIGTSLTKDSLMDLQTLWRPAILITFTLVITGLAIGLWTSRLLNIDVITTILGAA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLVVKCLNIFGVIKS CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNVNLIYYLLAGGIFGALALKTGIPAAPLAGALIGASILSISGKVDIAEWPIGTRTILE CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH IGIGTVIGTSLTKDSLMDLQTLWRPAILITFTLVITGLAIGLWTSRLLNIDVITTILGAA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLVVKCLNIFGVIKS CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA