| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967566
Identifier: 123967566
GI number: 123967566
Start: 30228
End: 30458
Strand: Direct
Name: 123967566
Synonym: A9601_00291
Alternate gene names: NA
Gene position: 30228-30458 (Clockwise)
Preceding gene: 123967563
Following gene: 123967570
Centisome position: 1.81
GC content: 28.57
Gene sequence:
>231_bases ATGATGAAGACAGCTCTTAAGCCCGATTTAAAATCAAAAACTTTCTTTGTTAGCAAAAGTTATCCCCGTCTTGTAGAGAA AGAAGTTAGTTTAGTTAATCTTAAATTCTATCAAAAATTATTTGTCTTTCTTCTTGCATTTTCGACAATTTTAATATTTC CAGAATCTCCAAAAGAATTGGAAAACATATGTGAGAGTTATAACTCTAGAAAAATATGTAATGTTTGGTAG
Upstream 100 bases:
>100_bases CCGCTGAAACCACATCCAAAGACTAAAAATTTATTTTTATTTCCGATTAAACTTGCAGGTTTTTTCATGCTTCGTTAAAG TAGTACATATGTATTAATTA
Downstream 100 bases:
>100_bases TCAAGCTGCTTTATATTCTGATTTATTTTTTTCGTAATTTTTATTTTTTACTTTAAAATTAGGATTAGCCCATTGCAGTA ATCTAATAGCTAATCTTAAA
Product: transcription factor TFIID (or TATA-box binding protein)
Products: NA
Alternate protein names: Transcription Factor TFIID-Like
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MMKTALKPDLKSKTFFVSKSYPRLVEKEVSLVNLKFYQKLFVFLLAFSTILIFPESPKELENICESYNSRKICNVW
Sequences:
>Translated_76_residues MMKTALKPDLKSKTFFVSKSYPRLVEKEVSLVNLKFYQKLFVFLLAFSTILIFPESPKELENICESYNSRKICNVW >Mature_76_residues MMKTALKPDLKSKTFFVSKSYPRLVEKEVSLVNLKFYQKLFVFLLAFSTILIFPESPKELENICESYNSRKICNVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8971; Mature: 8971
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKTALKPDLKSKTFFVSKSYPRLVEKEVSLVNLKFYQKLFVFLLAFSTILIFPESPKEL CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ENICESYNSRKICNVW HHHHHHCCCCCCCCCC >Mature Secondary Structure MMKTALKPDLKSKTFFVSKSYPRLVEKEVSLVNLKFYQKLFVFLLAFSTILIFPESPKEL CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ENICESYNSRKICNVW HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA