| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is thiL [H]
Identifier: 123967560
GI number: 123967560
Start: 25105
End: 26091
Strand: Reverse
Name: thiL [H]
Synonym: A9601_00231
Alternate gene names: 123967560
Gene position: 26091-25105 (Counterclockwise)
Preceding gene: 123967561
Following gene: 123967558
Centisome position: 1.56
GC content: 29.79
Gene sequence:
>987_bases ATGCATAAAGAAATACTAGAAGATATTGGGGAAAAAGAATTAATTAATAGGCTAGGAAAATTTATGCCTAAAAATCAAGT TTCAGATGATTGCGCTTTGATTAAAACTAAAAATGAAAATTTACTTGTTAATACTGATTCTTTGGTAGAAAATGTTCATT TTAATACAATTTCTATTTGTCCTCAAGACCTTGGTTGGAAAGCTGTTGTTAGCAACATCTCTGACTTATTATCAAGTGGA AGCAAAAAAACTATAGGTATTACAATAAGCCTAATTTTACCTGCTAAAACTGAGTGGATTTGGATTGAAGAATTATACAA AGGGATAAATAAAGCATTAAAAAAATATGGCGGGCTTATTCTAGGGGGAGATTGTTCAAAAGGGAATGAAAAAATCATTT CAATTACAGCCTTTGGGATTCAAGGTGAACTTGAATTACGAAGAAACGCATGTAAAGCAGGAGATATTATCTTAACGACA GGAATGCATGGCCTTAGCAAGCTAGGCTTTATGATACAAAATAAAATAAATTTCGATAATAATTTTTCTCTAAATGAAAG ATTAATCAGTAAGTCAATTAAACATTTTTGTCGCCCGAAAGTTTACCCAATTTTTCTCACAAATCTCATTAAAACTCGAT CCAATAAAAAAATAAGAAGAATAGGGTGTACTGATAGTAGCGACGGTCTTTTTCAATCTATACAAGATTTAGCAATAGCT AGCAACTGTAAAGCGATCATGAATTATGAAAAAATGCCCAAAGATAAGAATTGGCCAAAAGGAGATAAATGGGATGAATA TTATTTTTTTGGAGGTGAAGATTACGAATTAGTATTCTCTTTACCCAAAAAATGGGCCAATAATTTATGCAAACTCGATA AAAATATTTACGAGATTGGTTATTTCGTTAATGGTAAACCATCAATAGAATTTAAAGATAAAAATAAAAATCATTTATTG AAAAATATACCTTTCAAGCACTTTTAA
Upstream 100 bases:
>100_bases GGTTACGTTGTAGATGGATTTGATGTATTAGAAGAACTGACTAAAGATGACACAATAATTTCAATTGATGTTTTAGAAGG GATTCAAAACCTCAAATTAA
Downstream 100 bases:
>100_bases TTATTCCCAATTTTTAGCAACAATCTCTGCTAAATCAACAACCCTTTGACTATAGCCCCACTCGTTGTCATACCAAGCAA GGACCTTAACAAGATTGTCG
Product: putative thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MHKEILEDIGEKELINRLGKFMPKNQVSDDCALIKTKNENLLVNTDSLVENVHFNTISICPQDLGWKAVVSNISDLLSSG SKKTIGITISLILPAKTEWIWIEELYKGINKALKKYGGLILGGDCSKGNEKIISITAFGIQGELELRRNACKAGDIILTT GMHGLSKLGFMIQNKINFDNNFSLNERLISKSIKHFCRPKVYPIFLTNLIKTRSNKKIRRIGCTDSSDGLFQSIQDLAIA SNCKAIMNYEKMPKDKNWPKGDKWDEYYFFGGEDYELVFSLPKKWANNLCKLDKNIYEIGYFVNGKPSIEFKDKNKNHLL KNIPFKHF
Sequences:
>Translated_328_residues MHKEILEDIGEKELINRLGKFMPKNQVSDDCALIKTKNENLLVNTDSLVENVHFNTISICPQDLGWKAVVSNISDLLSSG SKKTIGITISLILPAKTEWIWIEELYKGINKALKKYGGLILGGDCSKGNEKIISITAFGIQGELELRRNACKAGDIILTT GMHGLSKLGFMIQNKINFDNNFSLNERLISKSIKHFCRPKVYPIFLTNLIKTRSNKKIRRIGCTDSSDGLFQSIQDLAIA SNCKAIMNYEKMPKDKNWPKGDKWDEYYFFGGEDYELVFSLPKKWANNLCKLDKNIYEIGYFVNGKPSIEFKDKNKNHLL KNIPFKHF >Mature_328_residues MHKEILEDIGEKELINRLGKFMPKNQVSDDCALIKTKNENLLVNTDSLVENVHFNTISICPQDLGWKAVVSNISDLLSSG SKKTIGITISLILPAKTEWIWIEELYKGINKALKKYGGLILGGDCSKGNEKIISITAFGIQGELELRRNACKAGDIILTT GMHGLSKLGFMIQNKINFDNNFSLNERLISKSIKHFCRPKVYPIFLTNLIKTRSNKKIRRIGCTDSSDGLFQSIQDLAIA SNCKAIMNYEKMPKDKNWPKGDKWDEYYFFGGEDYELVFSLPKKWANNLCKLDKNIYEIGYFVNGKPSIEFKDKNKNHLL KNIPFKHF
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=266, Percent_Identity=30.4511278195489, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 37339; Mature: 37339
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKEILEDIGEKELINRLGKFMPKNQVSDDCALIKTKNENLLVNTDSLVENVHFNTISIC CCHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECHHHHHHCCCCEEEEC PQDLGWKAVVSNISDLLSSGSKKTIGITISLILPAKTEWIWIEELYKGINKALKKYGGLI CCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHCCEE LGGDCSKGNEKIISITAFGIQGELELRRNACKAGDIILTTGMHGLSKLGFMIQNKINFDN EECCCCCCCCEEEEEEEECCCCHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCC NFSLNERLISKSIKHFCRPKVYPIFLTNLIKTRSNKKIRRIGCTDSSDGLFQSIQDLAIA CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHH SNCKAIMNYEKMPKDKNWPKGDKWDEYYFFGGEDYELVFSLPKKWANNLCKLDKNIYEIG HCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHCCCCEEEE YFVNGKPSIEFKDKNKNHLLKNIPFKHF EEECCCCCEEECCCCCCHHHHCCCCCCC >Mature Secondary Structure MHKEILEDIGEKELINRLGKFMPKNQVSDDCALIKTKNENLLVNTDSLVENVHFNTISIC CCHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECHHHHHHCCCCEEEEC PQDLGWKAVVSNISDLLSSGSKKTIGITISLILPAKTEWIWIEELYKGINKALKKYGGLI CCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHCCEE LGGDCSKGNEKIISITAFGIQGELELRRNACKAGDIILTTGMHGLSKLGFMIQNKINFDN EECCCCCCCCEEEEEEEECCCCHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCC NFSLNERLISKSIKHFCRPKVYPIFLTNLIKTRSNKKIRRIGCTDSSDGLFQSIQDLAIA CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHH SNCKAIMNYEKMPKDKNWPKGDKWDEYYFFGGEDYELVFSLPKKWANNLCKLDKNIYEIG HCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHCCCCEEEE YFVNGKPSIEFKDKNKNHLLKNIPFKHF EEECCCCCEEECCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA