| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is ybaB [C]
Identifier: 123967556
GI number: 123967556
Start: 21201
End: 21551
Strand: Reverse
Name: ybaB [C]
Synonym: A9601_00191
Alternate gene names: 123967556
Gene position: 21551-21201 (Counterclockwise)
Preceding gene: 123967557
Following gene: 123967550
Centisome position: 1.29
GC content: 30.48
Gene sequence:
>351_bases ATGGCGGGTTTTGGACTTCCTAACTTTGGACAACTTACAGAAGCTTTTAAAAAAGCTAAACAAATTCAGCAAGATGCTCA AAAATTACAAGATGAACTTGAAAATATGGAAATTGAAGGCAAAAGTGATGATGAAATGATAAAAGTTTGGATAAGTGGGA ACCAACTTCCTCTAAAGGTAGAAGTACAAGAAAATATCTTTAATTCAAATAAAGAACAAATAGAGAAAAATATTCTACAA GCTATCAAAAAAGCTCATGAATTATCAACTACAACTATGAAAGAAAGGATGAATGATTTGACTGGTGGATTAAATCTTAA TCTTCCTGGTTTTGATAATAGTGATTCTTAG
Upstream 100 bases:
>100_bases TAATTCAACAAAAAGTACTACAAAACAAAGGGATTTATTTGCAACCGGAAGTAAGAATGATTGGTTTTGACTATCCTTAC TAAAGAAACGTTTTAACAAA
Downstream 100 bases:
>100_bases AAGACTCAATCATTTCTTTATAAAAAGAATATCTTTCAAAGGATTTATTTAAATTACATCCCTCATCTTTTAAATGTAAG CAGTTACGAAATTTACACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MAGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKVEVQENIFNSNKEQIEKNILQ AIKKAHELSTTTMKERMNDLTGGLNLNLPGFDNSDS
Sequences:
>Translated_116_residues MAGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKVEVQENIFNSNKEQIEKNILQ AIKKAHELSTTTMKERMNDLTGGLNLNLPGFDNSDS >Mature_115_residues AGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKVEVQENIFNSNKEQIEKNILQA IKKAHELSTTTMKERMNDLTGGLNLNLPGFDNSDS
Specific function: Unknown
COG id: COG0718
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0133 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004401 [H]
Pfam domain/function: PF02575 DUF149 [H]
EC number: NA
Molecular weight: Translated: 13082; Mature: 12951
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEE EVQENIFNSNKEQIEKNILQAIKKAHELSTTTMKERMNDLTGGLNLNLPGFDNSDS EHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEE EVQENIFNSNKEQIEKNILQAIKKAHELSTTTMKERMNDLTGGLNLNLPGFDNSDS EHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA