Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is ybaB [C]

Identifier: 123967556

GI number: 123967556

Start: 21201

End: 21551

Strand: Reverse

Name: ybaB [C]

Synonym: A9601_00191

Alternate gene names: 123967556

Gene position: 21551-21201 (Counterclockwise)

Preceding gene: 123967557

Following gene: 123967550

Centisome position: 1.29

GC content: 30.48

Gene sequence:

>351_bases
ATGGCGGGTTTTGGACTTCCTAACTTTGGACAACTTACAGAAGCTTTTAAAAAAGCTAAACAAATTCAGCAAGATGCTCA
AAAATTACAAGATGAACTTGAAAATATGGAAATTGAAGGCAAAAGTGATGATGAAATGATAAAAGTTTGGATAAGTGGGA
ACCAACTTCCTCTAAAGGTAGAAGTACAAGAAAATATCTTTAATTCAAATAAAGAACAAATAGAGAAAAATATTCTACAA
GCTATCAAAAAAGCTCATGAATTATCAACTACAACTATGAAAGAAAGGATGAATGATTTGACTGGTGGATTAAATCTTAA
TCTTCCTGGTTTTGATAATAGTGATTCTTAG

Upstream 100 bases:

>100_bases
TAATTCAACAAAAAGTACTACAAAACAAAGGGATTTATTTGCAACCGGAAGTAAGAATGATTGGTTTTGACTATCCTTAC
TAAAGAAACGTTTTAACAAA

Downstream 100 bases:

>100_bases
AAGACTCAATCATTTCTTTATAAAAAGAATATCTTTCAAAGGATTTATTTAAATTACATCCCTCATCTTTTAAATGTAAG
CAGTTACGAAATTTACACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MAGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKVEVQENIFNSNKEQIEKNILQ
AIKKAHELSTTTMKERMNDLTGGLNLNLPGFDNSDS

Sequences:

>Translated_116_residues
MAGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKVEVQENIFNSNKEQIEKNILQ
AIKKAHELSTTTMKERMNDLTGGLNLNLPGFDNSDS
>Mature_115_residues
AGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKVEVQENIFNSNKEQIEKNILQA
IKKAHELSTTTMKERMNDLTGGLNLNLPGFDNSDS

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004401 [H]

Pfam domain/function: PF02575 DUF149 [H]

EC number: NA

Molecular weight: Translated: 13082; Mature: 12951

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEE
EVQENIFNSNKEQIEKNILQAIKKAHELSTTTMKERMNDLTGGLNLNLPGFDNSDS
EHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEE
EVQENIFNSNKEQIEKNILQAIKKAHELSTTTMKERMNDLTGGLNLNLPGFDNSDS
EHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA