| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is thrC [H]
Identifier: 123967140
GI number: 123967140
Start: 1702901
End: 1704004
Strand: Direct
Name: thrC [H]
Synonym: P9515_19071
Alternate gene names: 123967140
Gene position: 1702901-1704004 (Clockwise)
Preceding gene: 123967139
Following gene: NA
Centisome position: 99.93
GC content: 31.97
Gene sequence:
>1104_bases ATGAAATTCATAAATAAAATTAAAAATAAATTCAAAGGAAATTACAGAAAAAAAAGATGGCCAGGGTTAATTAATGCATA TAGACAATATCTGCCAGTATCTTCAAAAACTCCCATTATTTCCTTAAATGAAGGAAATACTCCTCTTATATTCAGTGAAT CAATTAGTAATCTACTTGGAAACAATACAAAAGTTTATTTAAAATATGACGGCTTAAATCCTACTGGATCATTCAAAGAC AGAGGAATGACAATGGCTATAAGTAAAGCAAAAGAAGAAGGGCGTGAAGCTGTAATATGCGCTAGTACAGGAAACACTTC TGCTGCTGCTGCTGCTTATGCTTCAAGAGGTGGTTTAAGATCTTATGTAATAATTCCTGATGGATACGTAGCTCAGGGAA AACTTGCTCAAGCTTTAATGTATGGTGCAGAAATTATTTCTATACAAGGTAATTTTGATAAAGCTTTGGAAATAGTTAGA GACTTATCTTCTGAATATCCAATAAACCTTGTAAATTCTGTTAATCCTTATCGAATACAAGGTCAAAAGACTGCTGCCTT TGAGATAGTAGATGACTTAGGTATTGCTCCTGACTGGCTTTGTATACCTATGGGAAATGCAGGAAACATAACGGCTTATT GGTTAGGGTTCAAAGAGTATAGAAAAATAAAAAAGAATTTAAAATTACCAATTATGATGGGATTTCAATCTGAAGGATCT GCACCTTTGGTAAAAAATATTATCGTTAAAGATCCTGAAACCATTGCAACAGCAATTAGAATTGGAAATCCTGTAAATAG AGACAAAGCAAAAATAGTCAAAAAAGAAAGCAAAGGAGATTTTCAGTCTGTTACTGATAAAGAAATTATTGAAGCTTATA AAATGCTTGCCAAAGAAGGAGTTTTTTGTGAACCAGCAAGCGCTGCCTCTGTTGCAGGGCTTATTAAAAATAAAAACAGA ATAAAAAAAGGATCAACAATAGTTTGTGTTTTAACAGGAAATGGGTTAAAAGATCCAGATTGTGCCATTAATAATAATGA CGCTGTTTTCAGAAAAAATATTGAACCTTCATTAAAAAATATAACTAAAGTTTTAGGATACTAA
Upstream 100 bases:
>100_bases CGCTTTAAGTAAAGTAATGAATAAAGTACAATCAATATCGGAATTATTAGAATTTTTCACTAGCAAGCCTCTAGAACAAA TTAAAAACAATTAAATAATT
Downstream 100 bases:
>100_bases TAAAACCAAAAAACAAAGTGACTGTGGAAATAGTTTAAAACTCATTAAAAATTGTTAATTACTGTCTAAAATCAAATCGA TTTTGTTGATAAAATTTTAA
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MKFINKIKNKFKGNYRKKRWPGLINAYRQYLPVSSKTPIISLNEGNTPLIFSESISNLLGNNTKVYLKYDGLNPTGSFKD RGMTMAISKAKEEGREAVICASTGNTSAAAAAYASRGGLRSYVIIPDGYVAQGKLAQALMYGAEIISIQGNFDKALEIVR DLSSEYPINLVNSVNPYRIQGQKTAAFEIVDDLGIAPDWLCIPMGNAGNITAYWLGFKEYRKIKKNLKLPIMMGFQSEGS APLVKNIIVKDPETIATAIRIGNPVNRDKAKIVKKESKGDFQSVTDKEIIEAYKMLAKEGVFCEPASAASVAGLIKNKNR IKKGSTIVCVLTGNGLKDPDCAINNNDAVFRKNIEPSLKNITKVLGY
Sequences:
>Translated_367_residues MKFINKIKNKFKGNYRKKRWPGLINAYRQYLPVSSKTPIISLNEGNTPLIFSESISNLLGNNTKVYLKYDGLNPTGSFKD RGMTMAISKAKEEGREAVICASTGNTSAAAAAYASRGGLRSYVIIPDGYVAQGKLAQALMYGAEIISIQGNFDKALEIVR DLSSEYPINLVNSVNPYRIQGQKTAAFEIVDDLGIAPDWLCIPMGNAGNITAYWLGFKEYRKIKKNLKLPIMMGFQSEGS APLVKNIIVKDPETIATAIRIGNPVNRDKAKIVKKESKGDFQSVTDKEIIEAYKMLAKEGVFCEPASAASVAGLIKNKNR IKKGSTIVCVLTGNGLKDPDCAINNNDAVFRKNIEPSLKNITKVLGY >Mature_367_residues MKFINKIKNKFKGNYRKKRWPGLINAYRQYLPVSSKTPIISLNEGNTPLIFSESISNLLGNNTKVYLKYDGLNPTGSFKD RGMTMAISKAKEEGREAVICASTGNTSAAAAAYASRGGLRSYVIIPDGYVAQGKLAQALMYGAEIISIQGNFDKALEIVR DLSSEYPINLVNSVNPYRIQGQKTAAFEIVDDLGIAPDWLCIPMGNAGNITAYWLGFKEYRKIKKNLKLPIMMGFQSEGS APLVKNIIVKDPETIATAIRIGNPVNRDKAKIVKKESKGDFQSVTDKEIIEAYKMLAKEGVFCEPASAASVAGLIKNKNR IKKGSTIVCVLTGNGLKDPDCAINNNDAVFRKNIEPSLKNITKVLGY
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Escherichia coli, GI2367138, Length=284, Percent_Identity=26.4084507042254, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17508781, Length=318, Percent_Identity=27.6729559748428, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6322631, Length=290, Percent_Identity=26.8965517241379, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 40205; Mature: 40205
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFINKIKNKFKGNYRKKRWPGLINAYRQYLPVSSKTPIISLNEGNTPLIFSESISNLLG CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCEEEHHHHHHHHC NNTKVYLKYDGLNPTGSFKDRGMTMAISKAKEEGREAVICASTGNTSAAAAAYASRGGLR CCEEEEEEECCCCCCCCCCCCCEEEEEHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCE SYVIIPDGYVAQGKLAQALMYGAEIISIQGNFDKALEIVRDLSSEYPINLVNSVNPYRIQ EEEECCCCCCCCHHHHHHHHHCEEEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCEEEC GQKTAAFEIVDDLGIAPDWLCIPMGNAGNITAYWLGFKEYRKIKKNLKLPIMMGFQSEGS CCCCHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECHHHHHHHHHCCCCEEEEECCCCCC APLVKNIIVKDPETIATAIRIGNPVNRDKAKIVKKESKGDFQSVTDKEIIEAYKMLAKEG CCHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHCC VFCEPASAASVAGLIKNKNRIKKGSTIVCVLTGNGLKDPDCAINNNDAVFRKNIEPSLKN CCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCEEECCCCHHHHH ITKVLGY HHHHHCC >Mature Secondary Structure MKFINKIKNKFKGNYRKKRWPGLINAYRQYLPVSSKTPIISLNEGNTPLIFSESISNLLG CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCEEEHHHHHHHHC NNTKVYLKYDGLNPTGSFKDRGMTMAISKAKEEGREAVICASTGNTSAAAAAYASRGGLR CCEEEEEEECCCCCCCCCCCCCEEEEEHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCE SYVIIPDGYVAQGKLAQALMYGAEIISIQGNFDKALEIVRDLSSEYPINLVNSVNPYRIQ EEEECCCCCCCCHHHHHHHHHCEEEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCEEEC GQKTAAFEIVDDLGIAPDWLCIPMGNAGNITAYWLGFKEYRKIKKNLKLPIMMGFQSEGS CCCCHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECHHHHHHHHHCCCCEEEEECCCCCC APLVKNIIVKDPETIATAIRIGNPVNRDKAKIVKKESKGDFQSVTDKEIIEAYKMLAKEG CCHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHCC VFCEPASAASVAGLIKNKNRIKKGSTIVCVLTGNGLKDPDCAINNNDAVFRKNIEPSLKN CCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCEEECCCCHHHHH ITKVLGY HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]