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The map label for this gene is recN [H]

Identifier: 123967137

GI number: 123967137

Start: 1698719

End: 1700395

Strand: Reverse

Name: recN [H]

Synonym: P9515_19041

Alternate gene names: 123967137

Gene position: 1700395-1698719 (Counterclockwise)

Preceding gene: NA

Following gene: 123967136

Centisome position: 99.78

GC content: 26.89

Gene sequence:

>1677_bases
ATGTTAATACAATTAAAATTAAAAAATATTGCCTTAATTGAAATTATAGAAATTAATTTCGAAAAAGGGTTGAATATTAT
TACGGGAGATTCAGGATCAGGAAAATCACTGATCCTAGATTCCTTAAATGTTTTATTCGGTGGAACTAATATACCTTTAA
AGCACTTAATTCGTCCAGGAAAAAAAGAATGTTTAATTGAGGCGAAATTTTCAAATTCCTCAAAACTAACTGATTGGTTT
TCAAGAAATGGTTTTAAAGAAATTTCGGATGAAATTTTCGTTAAAAGACAATCTTATAAAAAAAATAATAAAATTCATTC
AAAATATACGATAAACAATTTATCTGTTAACAAAAAAGTTTTGGGAAAATTAGGATTATTGTTAGTAGATTTTGCTGGTC
AATCTGATACCTTTTTATATGATAATCAAGATTACAGAAGAAGAATAATTGATGATTTAGGTTCAAAAAGATTAAAGAAG
ATTAATTTTGACATTAAAAGTTTATGGCAGGAATTTCAGATTCTTAAAAAAAGAAGGGAAGAGAAGAAGGAGGCATTTAA
AAAGAAAGAAGAGAATAATTTTGCAATTCAAGAGATGTTTAAAATGTTGGAAGAAGCTAATTTAAATTCAAAAAGTGAAA
TTTCAGAACTGCAATCAAAAGAGTTGCGACTTTCAAGCAATTTTGACATTAAAAACTCGATACAATTATCTCTTGATAAT
TTAAATAGCTATAACAACGATTCTTCCGTAAGTTATTTAATTGCTCAATCAATAAAACAATTAAGTAAAGTTAGTCAATT
TGATTCAAAGATTAAAGATTTAAATGATGATTTAATAAGTATTCAAAATGATGTAGAAAATTTAATTTTTGCTTTAACAA
AATATTCGGAACAACTAGAGAATGAGGATTTCAGCTTGGAAGAAGTTCAAAAAAGATTATTTTACTTACAAAATTTAGAG
AGAACATTTTCCCTCGAACTACCAGATTTAATTTTAAAAAGAAATGAATTAAAAACATTTATAGAGGATAATTTAGATGA
GGAAGAAATTAAGAAATTGGATATTCAAATCAATAAATTGGAAGTTAATTTAAATACCCTTTTTGAGATTCAGTCTTCTC
AAAGAAAGGAAACAGCTGATCAACTTCAAAATTCTGTAATTTCTATTTTAAAAAATTTAGGGTTAGAGAACGCAGATTTT
TCAATTGAATTTTCAAAAGTTGCATCTTCTTCAGAAGGCAATGAGACGATAGACTTTCTATTTTCGGCAAATCCTGATCA
AAAGTTAGCGCCATTATCCAAAATTATTTCTGGAGGAGAAATGTCAAGATTTTTATTAGCAATAAAATCTAGCATTTCTC
AAAAATCTAATACTTTTTTCTTAGATGAAATCGATAATGGTTTAAGTGGGAAATCATTATATTCTTTAGTTGAATTAATA
AAAGCTACTGCACAGGACAGGCAGGTTTTATGTATTACGCACCAGCCTTTATTAGCAGCAACTGGTAATTCTCATTTTAA
AGTCAAGAAAAATGTAATTAATGGAATAACTTTTACTTCTGTTCTTAAATTAAATACAAAAAGAGAAAGACAAAATGAGT
TAATTGAACTTATAGGTGGTGGTTTTAGTGAAGCAAATAGTTATGCATCTACACTAATCGATAAAGCAGCCGCATAA

Upstream 100 bases:

>100_bases
CTTCTATAAAATCTGTATAATCTTCGTTCATAACTTTATTTATTTAAACCCTTTTATTTTCTTCAAAAAGAAGTTAATTT
TTTTGTATGTAAGAATTATC

Downstream 100 bases:

>100_bases
ATAAAAAAATATAGACTATAATGATAATTCTTTAAATCAATCAAGATTTAAGCATGGTTAAAAAAAATATTGGTATCAAT
GAAGATAATTCCATAAAAAT

Product: DNA repair protein RecN, ABC transporter

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MLIQLKLKNIALIEIIEINFEKGLNIITGDSGSGKSLILDSLNVLFGGTNIPLKHLIRPGKKECLIEAKFSNSSKLTDWF
SRNGFKEISDEIFVKRQSYKKNNKIHSKYTINNLSVNKKVLGKLGLLLVDFAGQSDTFLYDNQDYRRRIIDDLGSKRLKK
INFDIKSLWQEFQILKKRREEKKEAFKKKEENNFAIQEMFKMLEEANLNSKSEISELQSKELRLSSNFDIKNSIQLSLDN
LNSYNNDSSVSYLIAQSIKQLSKVSQFDSKIKDLNDDLISIQNDVENLIFALTKYSEQLENEDFSLEEVQKRLFYLQNLE
RTFSLELPDLILKRNELKTFIEDNLDEEEIKKLDIQINKLEVNLNTLFEIQSSQRKETADQLQNSVISILKNLGLENADF
SIEFSKVASSSEGNETIDFLFSANPDQKLAPLSKIISGGEMSRFLLAIKSSISQKSNTFFLDEIDNGLSGKSLYSLVELI
KATAQDRQVLCITHQPLLAATGNSHFKVKKNVINGITFTSVLKLNTKRERQNELIELIGGGFSEANSYASTLIDKAAA

Sequences:

>Translated_558_residues
MLIQLKLKNIALIEIIEINFEKGLNIITGDSGSGKSLILDSLNVLFGGTNIPLKHLIRPGKKECLIEAKFSNSSKLTDWF
SRNGFKEISDEIFVKRQSYKKNNKIHSKYTINNLSVNKKVLGKLGLLLVDFAGQSDTFLYDNQDYRRRIIDDLGSKRLKK
INFDIKSLWQEFQILKKRREEKKEAFKKKEENNFAIQEMFKMLEEANLNSKSEISELQSKELRLSSNFDIKNSIQLSLDN
LNSYNNDSSVSYLIAQSIKQLSKVSQFDSKIKDLNDDLISIQNDVENLIFALTKYSEQLENEDFSLEEVQKRLFYLQNLE
RTFSLELPDLILKRNELKTFIEDNLDEEEIKKLDIQINKLEVNLNTLFEIQSSQRKETADQLQNSVISILKNLGLENADF
SIEFSKVASSSEGNETIDFLFSANPDQKLAPLSKIISGGEMSRFLLAIKSSISQKSNTFFLDEIDNGLSGKSLYSLVELI
KATAQDRQVLCITHQPLLAATGNSHFKVKKNVINGITFTSVLKLNTKRERQNELIELIGGGFSEANSYASTLIDKAAA
>Mature_558_residues
MLIQLKLKNIALIEIIEINFEKGLNIITGDSGSGKSLILDSLNVLFGGTNIPLKHLIRPGKKECLIEAKFSNSSKLTDWF
SRNGFKEISDEIFVKRQSYKKNNKIHSKYTINNLSVNKKVLGKLGLLLVDFAGQSDTFLYDNQDYRRRIIDDLGSKRLKK
INFDIKSLWQEFQILKKRREEKKEAFKKKEENNFAIQEMFKMLEEANLNSKSEISELQSKELRLSSNFDIKNSIQLSLDN
LNSYNNDSSVSYLIAQSIKQLSKVSQFDSKIKDLNDDLISIQNDVENLIFALTKYSEQLENEDFSLEEVQKRLFYLQNLE
RTFSLELPDLILKRNELKTFIEDNLDEEEIKKLDIQINKLEVNLNTLFEIQSSQRKETADQLQNSVISILKNLGLENADF
SIEFSKVASSSEGNETIDFLFSANPDQKLAPLSKIISGGEMSRFLLAIKSSISQKSNTFFLDEIDNGLSGKSLYSLVELI
KATAQDRQVLCITHQPLLAATGNSHFKVKKNVINGITFTSVLKLNTKRERQNELIELIGGGFSEANSYASTLIDKAAA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=560, Percent_Identity=25, Blast_Score=164, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 63528; Mature: 63528

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIQLKLKNIALIEIIEINFEKGLNIITGDSGSGKSLILDSLNVLFGGTNIPLKHLIRPG
CEEEEEECCEEEEEEEEEEHHCCCEEEECCCCCCCEEHHHHHHHHCCCCCCCHHHHCCCC
KKECLIEAKFSNSSKLTDWFSRNGFKEISDEIFVKRQSYKKNNKIHSKYTINNLSVNKKV
CHHEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEECEEEECCCCCCHHH
LGKLGLLLVDFAGQSDTFLYDNQDYRRRIIDDLGSKRLKKINFDIKSLWQEFQILKKRRE
HHHHCCCEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EKKEAFKKKEENNFAIQEMFKMLEEANLNSKSEISELQSKELRLSSNFDIKNSIQLSLDN
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCCCCCEEEEECC
LNSYNNDSSVSYLIAQSIKQLSKVSQFDSKIKDLNDDLISIQNDVENLIFALTKYSEQLE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
NEDFSLEEVQKRLFYLQNLERTFSLELPDLILKRNELKTFIEDNLDEEEIKKLDIQINKL
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEEE
EVNLNTLFEIQSSQRKETADQLQNSVISILKNLGLENADFSIEFSKVASSSEGNETIDFL
EEEHHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCCEEEEE
FSANPDQKLAPLSKIISGGEMSRFLLAIKSSISQKSNTFFLDEIDNGLSGKSLYSLVELI
EECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCHHHHHHHHHHH
KATAQDRQVLCITHQPLLAATGNSHFKVKKNVINGITFTSVLKLNTKRERQNELIELIGG
HHHCCCCEEEEEECCCEEEECCCCCEEEEHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCC
GFSEANSYASTLIDKAAA
CCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLIQLKLKNIALIEIIEINFEKGLNIITGDSGSGKSLILDSLNVLFGGTNIPLKHLIRPG
CEEEEEECCEEEEEEEEEEHHCCCEEEECCCCCCCEEHHHHHHHHCCCCCCCHHHHCCCC
KKECLIEAKFSNSSKLTDWFSRNGFKEISDEIFVKRQSYKKNNKIHSKYTINNLSVNKKV
CHHEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEECEEEECCCCCCHHH
LGKLGLLLVDFAGQSDTFLYDNQDYRRRIIDDLGSKRLKKINFDIKSLWQEFQILKKRRE
HHHHCCCEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EKKEAFKKKEENNFAIQEMFKMLEEANLNSKSEISELQSKELRLSSNFDIKNSIQLSLDN
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCCCCCEEEEECC
LNSYNNDSSVSYLIAQSIKQLSKVSQFDSKIKDLNDDLISIQNDVENLIFALTKYSEQLE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
NEDFSLEEVQKRLFYLQNLERTFSLELPDLILKRNELKTFIEDNLDEEEIKKLDIQINKL
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEEE
EVNLNTLFEIQSSQRKETADQLQNSVISILKNLGLENADFSIEFSKVASSSEGNETIDFL
EEEHHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCCEEEEE
FSANPDQKLAPLSKIISGGEMSRFLLAIKSSISQKSNTFFLDEIDNGLSGKSLYSLVELI
EECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCHHHHHHHHHHH
KATAQDRQVLCITHQPLLAATGNSHFKVKKNVINGITFTSVLKLNTKRERQNELIELIGG
HHHCCCCEEEEEECCCEEEECCCCCEEEEHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCC
GFSEANSYASTLIDKAAA
CCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]