| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123967107
Identifier: 123967107
GI number: 123967107
Start: 1663168
End: 1663506
Strand: Reverse
Name: 123967107
Synonym: P9515_18741
Alternate gene names: NA
Gene position: 1663506-1663168 (Counterclockwise)
Preceding gene: 123967118
Following gene: 123967106
Centisome position: 97.61
GC content: 34.51
Gene sequence:
>339_bases ATGACTGAGATCGTAAATCTTTCAATCAGTCAAAGTGCTGCATCAGAGCTATCTAGGCAAGCATCCTTTGGGGGTTCTCC AGGTGAAATGTTTATTGACCTAATTAAAGATGAAGGTTCAGAGGGTTGGATGCATATTAAATTGAAACCAGGAATAAATA ATGGTTCTCCAATATCTAGAACCGAGGGTATAACTTTATATGCTGATATTAAAAAGTTTTCTTTGTTAAAAGATTTAAAA CTTGATTATTACAGTGATTTAAGTGGTGGTGGTTTTCTTATCTCAACTCCAGAAAATGCAAAAAGGTGCTCTTGTGGCTC TGGATTTAAATTGATTTAG
Upstream 100 bases:
>100_bases AATTATTATAAGGGCGATTAGCTCAGCGGTAGAGCGCCTGCCTTACAAGCAGGATGTCCCTGGTTCGAACCCTGGATCGC CCATTGACTAATTTATTTTA
Downstream 100 bases:
>100_bases AATAATTTTTATTTTTGCAAACTGATATTTTTCAATTATTTGCTTCTATCAATATAAAATAAATAAAAAGCTAATGAAAT AACTATTGCAAATGAATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTEIVNLSISQSAASELSRQASFGGSPGEMFIDLIKDEGSEGWMHIKLKPGINNGSPISRTEGITLYADIKKFSLLKDLK LDYYSDLSGGGFLISTPENAKRCSCGSGFKLI
Sequences:
>Translated_112_residues MTEIVNLSISQSAASELSRQASFGGSPGEMFIDLIKDEGSEGWMHIKLKPGINNGSPISRTEGITLYADIKKFSLLKDLK LDYYSDLSGGGFLISTPENAKRCSCGSGFKLI >Mature_111_residues TEIVNLSISQSAASELSRQASFGGSPGEMFIDLIKDEGSEGWMHIKLKPGINNGSPISRTEGITLYADIKKFSLLKDLKL DYYSDLSGGGFLISTPENAKRCSCGSGFKLI
Specific function: Unknown
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12081; Mature: 11950
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEIVNLSISQSAASELSRQASFGGSPGEMFIDLIKDEGSEGWMHIKLKPGINNGSPISR CCEEEEEEECHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCEEEEEECCCCCCCCCCCC TEGITLYADIKKFSLLKDLKLDYYSDLSGGGFLISTPENAKRCSCGSGFKLI CCCEEEEECCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure TEIVNLSISQSAASELSRQASFGGSPGEMFIDLIKDEGSEGWMHIKLKPGINNGSPISR CEEEEEEECHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCEEEEEECCCCCCCCCCCC TEGITLYADIKKFSLLKDLKLDYYSDLSGGGFLISTPENAKRCSCGSGFKLI CCCEEEEECCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA