| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123967083
Identifier: 123967083
GI number: 123967083
Start: 1639035
End: 1640570
Strand: Reverse
Name: 123967083
Synonym: P9515_18501
Alternate gene names: NA
Gene position: 1640570-1639035 (Counterclockwise)
Preceding gene: 123967090
Following gene: 123967082
Centisome position: 96.27
GC content: 27.8
Gene sequence:
>1536_bases ATGCTGCGCAGATTTAACTTTTTACATATTATTTATAGCTGTTATTTACTATGTTGTATTACACCAATATTTAAAATAAA TTTGTATGCAAAAGAATCTTTAAAAATAAATCTTACTGAAGAATTAAAAAAAGGTAATTTTTTAATTGGATTAAAACAAT ATTTAGGAGCTAATACGGATAGTTTTTTTGAAAAACAAAATATCACGTTTATAACAAACAAAAATTTCATTACACTCCAT TCCTCTAATGGTCTTAAATATAAATCTAAAAAAATAAATATTCTTTTTAAGAAGATTCCTTTGAAAACTCCTGTCGTAAT TGAGAGAATTGTATTTGGTCCATTTGCAAGCTTTGAATCTGCTCAAAGGAAAGCTAAAAACTTAAAAGAAAAAGGTTATG AAGCTCTCGTAGCGTATCCAAAAAATTGGGAAGTTTGGATACCAATAAGTAAAAATGTTCCCAATAAATTGAACTATAAA ATTTTCAAAAAATCTTATAGTTCAAAAATAGTTCCTTTTCTTATCAGTGAATATTCTCAAAAACAACTTCAGGGCCCGAT ATTCCTATCTTCATCAGATGAGATAAGAATTAATGATATTAATTTTGGGAAAAAGTTTTATTTAGCCAAAGATTCATACG GAACTTGGACGTTGATTCAGAAAATTAAATTTGATGATTATCTGAAAGGTGTCCTGCCATATGAGATAGGCTCTAATTCA CCTTTAGAAGCTTTAAAAGCACAAGCAGTGATTGCCAGGACTTGGGCTCTTTATAATTCAGAAAGATTTAATATCGATAA TTATCATTTGTGTATCAGTACTCAATGTCAAGTTTATAAACCCCCTAATATTAAATATAAAAATGTGAATAAAGCGATTA TAGATACTTCTAATTTAATAATTACTTATAAAAACAAACCAATTAATTCCTTTTATCATGGCTCTAATGGTGGTTTATCA GCTAGTGCAAGCGAATCTTGGCAAATAAAAGATTACCGCTATCTTAATGCAATGATTGATGGTTTAGATCCTTTAAAAAA AACTTTTAAGCTTCCAATCAAAACTGGAGATGAATTAAACAAATTTCTTGATTTTGCAGATGAGAAGGTTTATGGTGACA GGCATTCTCTTTATCGATGGCAGAAAAAAGTTTCTAGTGAAATAATCCAAAATAATTTAATAAATAATCAATTGATTAAG GAGAAAGCAGATTTGGTTAATCTAAATATTATTGAGAGAGGTTCCAGTGGAAGAGTAATAAAATTAGAAATTAAGCTGAA AAATGTTCAAAAACCCATAGTTCTTATAAAAGATGATATTCGAAGAATATTGAGTTTTTTACCAAGTAATTTATTTATTA TTAATAAATTAAATGATAATCTTTGGCTTTTTAAAGGAGGTGGCTTCGGTCATGGTGTAGGTTTGTCTCAATCAGGAGCG ATCGAAATGGCTAAATTGGGTTTTACTTATGAACAAATATTGAATCATTATTATCAGGGAACAAAAATTAAAAAAATTGA GATATTGTCTCATTAA
Upstream 100 bases:
>100_bases TTTAGACATTTCCTTTGATAACGTTTATTCTAGATAATCTAAACCTTTATATGCATTGGTGCAAATTAAAGTTTTGATTT GATAAGGAAATTTCCATCGT
Downstream 100 bases:
>100_bases CTAAAATAATAAACATAAGAAAGCATTCATGAACAACGGTTTTTACAAAAATCGAAGATTAAAATCATTATTATTTTTTG TTGTTTGTTTATCAGTAAGT
Product: putative amidase enhancer
Products: NA
Alternate protein names: H-34 [H]
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MLRRFNFLHIIYSCYLLCCITPIFKINLYAKESLKINLTEELKKGNFLIGLKQYLGANTDSFFEKQNITFITNKNFITLH SSNGLKYKSKKINILFKKIPLKTPVVIERIVFGPFASFESAQRKAKNLKEKGYEALVAYPKNWEVWIPISKNVPNKLNYK IFKKSYSSKIVPFLISEYSQKQLQGPIFLSSSDEIRINDINFGKKFYLAKDSYGTWTLIQKIKFDDYLKGVLPYEIGSNS PLEALKAQAVIARTWALYNSERFNIDNYHLCISTQCQVYKPPNIKYKNVNKAIIDTSNLIITYKNKPINSFYHGSNGGLS ASASESWQIKDYRYLNAMIDGLDPLKKTFKLPIKTGDELNKFLDFADEKVYGDRHSLYRWQKKVSSEIIQNNLINNQLIK EKADLVNLNIIERGSSGRVIKLEIKLKNVQKPIVLIKDDIRRILSFLPSNLFIINKLNDNLWLFKGGGFGHGVGLSQSGA IEMAKLGFTYEQILNHYYQGTKIKKIEILSH
Sequences:
>Translated_511_residues MLRRFNFLHIIYSCYLLCCITPIFKINLYAKESLKINLTEELKKGNFLIGLKQYLGANTDSFFEKQNITFITNKNFITLH SSNGLKYKSKKINILFKKIPLKTPVVIERIVFGPFASFESAQRKAKNLKEKGYEALVAYPKNWEVWIPISKNVPNKLNYK IFKKSYSSKIVPFLISEYSQKQLQGPIFLSSSDEIRINDINFGKKFYLAKDSYGTWTLIQKIKFDDYLKGVLPYEIGSNS PLEALKAQAVIARTWALYNSERFNIDNYHLCISTQCQVYKPPNIKYKNVNKAIIDTSNLIITYKNKPINSFYHGSNGGLS ASASESWQIKDYRYLNAMIDGLDPLKKTFKLPIKTGDELNKFLDFADEKVYGDRHSLYRWQKKVSSEIIQNNLINNQLIK EKADLVNLNIIERGSSGRVIKLEIKLKNVQKPIVLIKDDIRRILSFLPSNLFIINKLNDNLWLFKGGGFGHGVGLSQSGA IEMAKLGFTYEQILNHYYQGTKIKKIEILSH >Mature_511_residues MLRRFNFLHIIYSCYLLCCITPIFKINLYAKESLKINLTEELKKGNFLIGLKQYLGANTDSFFEKQNITFITNKNFITLH SSNGLKYKSKKINILFKKIPLKTPVVIERIVFGPFASFESAQRKAKNLKEKGYEALVAYPKNWEVWIPISKNVPNKLNYK IFKKSYSSKIVPFLISEYSQKQLQGPIFLSSSDEIRINDINFGKKFYLAKDSYGTWTLIQKIKFDDYLKGVLPYEIGSNS PLEALKAQAVIARTWALYNSERFNIDNYHLCISTQCQVYKPPNIKYKNVNKAIIDTSNLIITYKNKPINSFYHGSNGGLS ASASESWQIKDYRYLNAMIDGLDPLKKTFKLPIKTGDELNKFLDFADEKVYGDRHSLYRWQKKVSSEIIQNNLINNQLIK EKADLVNLNIIERGSSGRVIKLEIKLKNVQKPIVLIKDDIRRILSFLPSNLFIINKLNDNLWLFKGGGFGHGVGLSQSGA IEMAKLGFTYEQILNHYYQGTKIKKIEILSH
Specific function: Might be involved in sporulation [H]
COG id: COG2385
COG function: function code D; Sporulation protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013486 - InterPro: IPR013693 [H]
Pfam domain/function: PF08486 SpoIID [H]
EC number: NA
Molecular weight: Translated: 58897; Mature: 58897
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRFNFLHIIYSCYLLCCITPIFKINLYAKESLKINLTEELKKGNFLIGLKQYLGANTD CCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEEEHHHHCCCCEEEEEHHHHCCCCH SFFEKQNITFITNKNFITLHSSNGLKYKSKKINILFKKIPLKTPVVIERIVFGPFASFES HHHHCCCEEEEECCCEEEEECCCCCEEECCEEEEEEEECCCCCHHHHHHHHHCCCHHHHH AQRKAKNLKEKGYEALVAYPKNWEVWIPISKNVPNKLNYKIFKKSYSSKIVPFLISEYSQ HHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCHHHEECCCCCCHHHHHHHHHHH KQLQGPIFLSSSDEIRINDINFGKKFYLAKDSYGTWTLIQKIKFDDYLKGVLPYEIGSNS HHCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCEEEHHHHCHHHHHCCCCCEECCCCC PLEALKAQAVIARTWALYNSERFNIDNYHLCISTQCQVYKPPNIKYKNVNKAIIDTSNLI CHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCEEEECCCCCEECCCCEEEEECCCEE ITYKNKPINSFYHGSNGGLSASASESWQIKDYRYLNAMIDGLDPLKKTFKLPIKTGDELN EEECCCCCCCEECCCCCCCCCCCCCCEEECHHHHHHHHHHCCHHHHHHHCCCCCCCHHHH KFLDFADEKVYGDRHSLYRWQKKVSSEIIQNNLINNQLIKEKADLVNLNIIERGSSGRVI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEEEEEECCCCCEE KLEIKLKNVQKPIVLIKDDIRRILSFLPSNLFIINKLNDNLWLFKGGGFGHGVGLSQSGA EEEEEEECCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCC IEMAKLGFTYEQILNHYYQGTKIKKIEILSH EEEEHHCCCHHHHHHHHHCCCEEEEEEEECC >Mature Secondary Structure MLRRFNFLHIIYSCYLLCCITPIFKINLYAKESLKINLTEELKKGNFLIGLKQYLGANTD CCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEEEHHHHCCCCEEEEEHHHHCCCCH SFFEKQNITFITNKNFITLHSSNGLKYKSKKINILFKKIPLKTPVVIERIVFGPFASFES HHHHCCCEEEEECCCEEEEECCCCCEEECCEEEEEEEECCCCCHHHHHHHHHCCCHHHHH AQRKAKNLKEKGYEALVAYPKNWEVWIPISKNVPNKLNYKIFKKSYSSKIVPFLISEYSQ HHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCHHHEECCCCCCHHHHHHHHHHH KQLQGPIFLSSSDEIRINDINFGKKFYLAKDSYGTWTLIQKIKFDDYLKGVLPYEIGSNS HHCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCEEEHHHHCHHHHHCCCCCEECCCCC PLEALKAQAVIARTWALYNSERFNIDNYHLCISTQCQVYKPPNIKYKNVNKAIIDTSNLI CHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCEEEECCCCCEECCCCEEEEECCCEE ITYKNKPINSFYHGSNGGLSASASESWQIKDYRYLNAMIDGLDPLKKTFKLPIKTGDELN EEECCCCCCCEECCCCCCCCCCCCCCEEECHHHHHHHHHHCCHHHHHHHCCCCCCCHHHH KFLDFADEKVYGDRHSLYRWQKKVSSEIIQNNLINNQLIKEKADLVNLNIIERGSSGRVI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEEEEEECCCCCEE KLEIKLKNVQKPIVLIKDDIRRILSFLPSNLFIINKLNDNLWLFKGGGFGHGVGLSQSGA EEEEEEECCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCC IEMAKLGFTYEQILNHYYQGTKIKKIEILSH EEEEHHCCCHHHHHHHHHCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA