Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is yjeE [C]

Identifier: 123967048

GI number: 123967048

Start: 1599067

End: 1599504

Strand: Direct

Name: yjeE [C]

Synonym: P9515_18151

Alternate gene names: 123967048

Gene position: 1599067-1599504 (Clockwise)

Preceding gene: 123967045

Following gene: 123967050

Centisome position: 93.83

GC content: 31.74

Gene sequence:

>438_bases
GTGTTTATTGGGAATTTAATAGAGACAATTCAATTAGGAAAAAAATTCGCTCAAGAATTAAATCCAAAATCAATTATTTT
ATTACAAGGTCCTCTTGGAGCAGGAAAAACTTCTTTTGTCCAAGGTATCGCAGATGGGCTTTGCATTAAGGAGGATATTA
CAAGTCCAACCTTTGCTTTATCGCATCATTATAACTCGGGAATAACTCCACTAATTCACTTAGATTTATATAGGCTAGAA
AATAAATTTATGGCAAAAGAATTATTTATATCCGAAGAAGAAGAGGCTATACAAAATGAAGCAATAATGGTTATTGAATG
GCCAGAGTTGATAGAGCCAGTTCTGGATAATTTCTGGAAAATAGAAATAAGTTACGCTCCAAATTTTGGGAGAAATTATA
AAATCTGGGATCCTAAAAATTCATTAACCTTTGAATAA

Upstream 100 bases:

>100_bases
TAATAACGTAGTTTGGTATAGATGTTTTAATCGAGTTAGCAATAACCATTTCTAAAAAAATTCTTATCATTTAAACTATA
AATGATTTTTATGTAATTTT

Downstream 100 bases:

>100_bases
TCTGGTTGCTGCTCAATCGCGCCCTCACCAAGACAAGTTATTAACCCACAAACACCTGCAAACCTAACACAATTTTGTAT
TTCTGATTCATTTGAGGGGT

Product: ATPase or kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MFIGNLIETIQLGKKFAQELNPKSIILLQGPLGAGKTSFVQGIADGLCIKEDITSPTFALSHHYNSGITPLIHLDLYRLE
NKFMAKELFISEEEEAIQNEAIMVIEWPELIEPVLDNFWKIEISYAPNFGRNYKIWDPKNSLTFE

Sequences:

>Translated_145_residues
MFIGNLIETIQLGKKFAQELNPKSIILLQGPLGAGKTSFVQGIADGLCIKEDITSPTFALSHHYNSGITPLIHLDLYRLE
NKFMAKELFISEEEEAIQNEAIMVIEWPELIEPVLDNFWKIEISYAPNFGRNYKIWDPKNSLTFE
>Mature_145_residues
MFIGNLIETIQLGKKFAQELNPKSIILLQGPLGAGKTSFVQGIADGLCIKEDITSPTFALSHHYNSGITPLIHLDLYRLE
NKFMAKELFISEEEEAIQNEAIMVIEWPELIEPVLDNFWKIEISYAPNFGRNYKIWDPKNSLTFE

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=128, Percent_Identity=33.59375, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 16543; Mature: 16543

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIGNLIETIQLGKKFAQELNPKSIILLQGPLGAGKTSFVQGIADGLCIKEDITSPTFAL
CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCEEECCCCCCCEEEE
SHHYNSGITPLIHLDLYRLENKFMAKELFISEEEEAIQNEAIMVIEWPELIEPVLDNFWK
EECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECHHHHHHHHCCEEE
IEISYAPNFGRNYKIWDPKNSLTFE
EEEEECCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MFIGNLIETIQLGKKFAQELNPKSIILLQGPLGAGKTSFVQGIADGLCIKEDITSPTFAL
CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCEEECCCCCCCEEEE
SHHYNSGITPLIHLDLYRLENKFMAKELFISEEEEAIQNEAIMVIEWPELIEPVLDNFWK
EECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECHHHHHHHHCCEEE
IEISYAPNFGRNYKIWDPKNSLTFE
EEEEECCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]