| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is mreC [H]
Identifier: 123967043
GI number: 123967043
Start: 1594626
End: 1595375
Strand: Reverse
Name: mreC [H]
Synonym: P9515_18101
Alternate gene names: 123967043
Gene position: 1595375-1594626 (Counterclockwise)
Preceding gene: 123967044
Following gene: 123967042
Centisome position: 93.62
GC content: 33.07
Gene sequence:
>750_bases ATGGTAGATATTCGAAGAATATCAACTAATCGTTGGTGGCATAAAAAGAAGAATTGGGTTTTATTTATATTTTTATTGTT TTTGATTTTTGTGAGAATATCCAGAGGATCTCTATATAAAGACCTTTATTTTTTAATTTCAAAACCGTTTTGGCCAGGCC AATTTCAAAGAGAGGTTTTAACTAAAAGTGTTGAACAAGAGTCTTTTGTAAGGTTAAAACAGCTAGAGAAAGATAATAAA AGATTACGTGAAATTTTATCACTACAAAGATTATCTGACTCTGAAACTATTTCAGCAACTGTTATTTCAAGAAAAACAGG GAGCTGGTGGAGGCAAATTATTTTAAATAAAGGTTCCAAAGACGGAGTAGAAGTTGGGAGTTTTGTTGTTGGCCCTGGAG GATTATTAGGAAGAGTGAATAATACTTCTTTATTTACTTCGTCTGTCACATTATTAACTTCTCCTGAGAGTAAAGTGGGG ATTTGGGTTGAAAGAATTCAGAGCCATGGGTTACTAGTGGGCTTAGGAAATGATCATCCAAAAGTAATTTTTTATAATAA GGAGGTTGATATTGAAGTGGGCGATTTTGTTTTATCATCCCCCGCCAGCACTTTATTGCCTCCAAATATTCCTATAGGTA TTATTCAATCTGTTGATGCGGAATTCAAAGCACAAAAAACTGCAAATCTTTTGCTTTTAGGAAAACCTCAAGCAATAGAT TGGGTTCAAATCGTAAAAGTTAAAATTTAA
Upstream 100 bases:
>100_bases GTTGTTAACGGTTGTGGATTGGTACTAGACGATTTCAAAAAACTCAAAAGAGTTGTTGATACTCCTGATTTTATAAGGAA TGCGATCAGAGATTGATTGA
Downstream 100 bases:
>100_bases ATGGAAAAATACTTAATTAAACATTTTCCTTTAATTTCTTTTTTATTTCTTCCAATAGTTTACTTTTGGGATCCGAATTG GATGGGATTTTTTGGGGTTC
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MVDIRRISTNRWWHKKKNWVLFIFLLFLIFVRISRGSLYKDLYFLISKPFWPGQFQREVLTKSVEQESFVRLKQLEKDNK RLREILSLQRLSDSETISATVISRKTGSWWRQIILNKGSKDGVEVGSFVVGPGGLLGRVNNTSLFTSSVTLLTSPESKVG IWVERIQSHGLLVGLGNDHPKVIFYNKEVDIEVGDFVLSSPASTLLPPNIPIGIIQSVDAEFKAQKTANLLLLGKPQAID WVQIVKVKI
Sequences:
>Translated_249_residues MVDIRRISTNRWWHKKKNWVLFIFLLFLIFVRISRGSLYKDLYFLISKPFWPGQFQREVLTKSVEQESFVRLKQLEKDNK RLREILSLQRLSDSETISATVISRKTGSWWRQIILNKGSKDGVEVGSFVVGPGGLLGRVNNTSLFTSSVTLLTSPESKVG IWVERIQSHGLLVGLGNDHPKVIFYNKEVDIEVGDFVLSSPASTLLPPNIPIGIIQSVDAEFKAQKTANLLLLGKPQAID WVQIVKVKI >Mature_249_residues MVDIRRISTNRWWHKKKNWVLFIFLLFLIFVRISRGSLYKDLYFLISKPFWPGQFQREVLTKSVEQESFVRLKQLEKDNK RLREILSLQRLSDSETISATVISRKTGSWWRQIILNKGSKDGVEVGSFVVGPGGLLGRVNNTSLFTSSVTLLTSPESKVG IWVERIQSHGLLVGLGNDHPKVIFYNKEVDIEVGDFVLSSPASTLLPPNIPIGIIQSVDAEFKAQKTANLLLLGKPQAID WVQIVKVKI
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 28287; Mature: 28287
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDIRRISTNRWWHKKKNWVLFIFLLFLIFVRISRGSLYKDLYFLISKPFWPGQFQREVL CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHH TKSVEQESFVRLKQLEKDNKRLREILSLQRLSDSETISATVISRKTGSWWRQIILNKGSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCCC DGVEVGSFVVGPGGLLGRVNNTSLFTSSVTLLTSPESKVGIWVERIQSHGLLVGLGNDHP CCCEECCEEECCCCEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCEEEEECCCCC KVIFYNKEVDIEVGDFVLSSPASTLLPPNIPIGIIQSVDAEFKAQKTANLLLLGKPQAID EEEEECCEECEEECCEEECCCCCCCCCCCCCCHHHHHCCCHHHHCCCCCEEEEECCCCCC WVQIVKVKI EEEEEEEEC >Mature Secondary Structure MVDIRRISTNRWWHKKKNWVLFIFLLFLIFVRISRGSLYKDLYFLISKPFWPGQFQREVL CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHH TKSVEQESFVRLKQLEKDNKRLREILSLQRLSDSETISATVISRKTGSWWRQIILNKGSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCCC DGVEVGSFVVGPGGLLGRVNNTSLFTSSVTLLTSPESKVGIWVERIQSHGLLVGLGNDHP CCCEECCEEECCCCEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCEEEEECCCCC KVIFYNKEVDIEVGDFVLSSPASTLLPPNIPIGIIQSVDAEFKAQKTANLLLLGKPQAID EEEEECCEECEEECCEEECCCCCCCCCCCCCCHHHHHCCCHHHHCCCCCEEEEECCCCCC WVQIVKVKI EEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]