| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123967022
Identifier: 123967022
GI number: 123967022
Start: 1577063
End: 1577518
Strand: Reverse
Name: 123967022
Synonym: P9515_17891
Alternate gene names: NA
Gene position: 1577518-1577063 (Counterclockwise)
Preceding gene: 123967023
Following gene: 123967020
Centisome position: 92.57
GC content: 30.04
Gene sequence:
>456_bases TTGAAAGAAGAACCATGTCAATGTCCTGATTGTCAGAAATTCTATAAAGAACATGATCGTTTACTACGAGAATTTCCTAC TTTCAAACAGCAACAGGAATTAAATTGGGCATCCATACAATCTTTTAGAACTCTTTGTAGCAGAGTAACTGAAGAATTAC AAAGGCAACAATCTGACAAAAGTGTTGAAGATAATCTTGTCAAAGATGATAAACATCTCTCTGAAACAGAAATTACAAAT GCAATAGATGAATTAGAAAATGTTAATGCTTATTTGTATTCGATTGAAGCTTTAATGGAGCGCATTTTTGATATTAAAGT TTCTGAAAATATTGAAGCCAAATTTCAAGAAATATCGAAGAAGTTGGCTCCGGATCCACTAAATATTGATAGATTAATAT TAAATAGATTATTTCATCAAACACCAGATTTACCTGATAAGAATAATTCTAATTAG
Upstream 100 bases:
>100_bases CCTGATAGTCCAGATTCTCTTGATGAAAATGACGAATTATTGGATGGACCTACAATATTGCCTAAATAGTGCAATGATAT AAAAAGAGTTATTTATTCTT
Downstream 100 bases:
>100_bases TCACTTCTTCAATATCACATGTAATTTCAACTGGCATAGGTGAAACTTTCCAAATAGAATCACAATATTCTCTAATTGAT CTATCTGAAGAAAAATATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKEEPCQCPDCQKFYKEHDRLLREFPTFKQQQELNWASIQSFRTLCSRVTEELQRQQSDKSVEDNLVKDDKHLSETEITN AIDELENVNAYLYSIEALMERIFDIKVSENIEAKFQEISKKLAPDPLNIDRLILNRLFHQTPDLPDKNNSN
Sequences:
>Translated_151_residues MKEEPCQCPDCQKFYKEHDRLLREFPTFKQQQELNWASIQSFRTLCSRVTEELQRQQSDKSVEDNLVKDDKHLSETEITN AIDELENVNAYLYSIEALMERIFDIKVSENIEAKFQEISKKLAPDPLNIDRLILNRLFHQTPDLPDKNNSN >Mature_151_residues MKEEPCQCPDCQKFYKEHDRLLREFPTFKQQQELNWASIQSFRTLCSRVTEELQRQQSDKSVEDNLVKDDKHLSETEITN AIDELENVNAYLYSIEALMERIFDIKVSENIEAKFQEISKKLAPDPLNIDRLILNRLFHQTPDLPDKNNSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17860; Mature: 17860
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEEPCQCPDCQKFYKEHDRLLREFPTFKQQQELNWASIQSFRTLCSRVTEELQRQQSDK CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC SVEDNLVKDDKHLSETEITNAIDELENVNAYLYSIEALMERIFDIKVSENIEAKFQEISK HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH KLAPDPLNIDRLILNRLFHQTPDLPDKNNSN HHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKEEPCQCPDCQKFYKEHDRLLREFPTFKQQQELNWASIQSFRTLCSRVTEELQRQQSDK CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC SVEDNLVKDDKHLSETEITNAIDELENVNAYLYSIEALMERIFDIKVSENIEAKFQEISK HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH KLAPDPLNIDRLILNRLFHQTPDLPDKNNSN HHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA