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The map label for this gene is recA

Identifier: 123966977

GI number: 123966977

Start: 1531998

End: 1533110

Strand: Direct

Name: recA

Synonym: P9515_17441

Alternate gene names: 123966977

Gene position: 1531998-1533110 (Clockwise)

Preceding gene: 123966976

Following gene: 123966985

Centisome position: 89.9

GC content: 38.01

Gene sequence:

>1113_bases
ATGAGTTTCGAAGAAAGGAGAAAAAAAGATTCAAAGGAATCCTCGTCTAAAGAGAAAGACAAAGCATTAAATCTAGTCTT
AGGACAGATAGAAAGAAACTTTGGTAGGGGATCAATAATGAGGCTTGGGGATGCCTCCAGAATGAAAGTAGAAACAATAT
CTACAGGTGCCCTTACATTAGACTTAGCACTAGGAGGGGGTTATCCAAAGGGAAGAGTCGTCGAGGTATACGGACCTGAG
AGTTCGGGAAAAACAACTCTCACGCTTCACGCAATCGCAGAGGTACAAAAAAACGGAGGCATAGCTGCATTTGTCGATGC
TGAACATGCTTTAGATCCAGTCTATGCTGCCTCTTTAGGAGTAGATGTTGAGAATTTACTAGTCTCACAACCAGATACAG
GTGAAATGGCTTTAGAAATAGTTGATCAGCTCATAAGATCAACTGCAGTTGACCTTGTAGTTGTTGACTCGGTAGCAGCT
CTAACTCCAAGAGCAGAAATAGAAGGTGAAATGGGAGATCACGTAATAGGGAGTCAAGCAAGGCTAATGAGTCAAGCGAT
GAGAAAAATAACCGGCAATATTGGAAAATCAGGATGTACAGTGATATTCCTCAATCAATTACGTTTGAAAATAGGTGTAA
CATATGGGAATCCAGAGACAACTACAGGAGGTAACGCATTAAAGTTTTATGCGTCAGTAAGACTTGATATTAGGAGAATT
CAGACTCTTAAAAGAGGTACAGAAGAATATGGAATAAGAGCAAAAGTAAAAGTAGCAAAAAATAAAGTCGCTCCTCCGTT
TAGAATTGCAGAATTTGATATCCTATTCGGTAAAGGCATTAGCACAACAGGATGTTTATTAGATTTAGCTGAAGAGACTA
ATATCATAATTAGAAGAGGTGCTTGGTATAGTTATGAAGGAGAAAATATTGGACAAGGAAGAGATAACACAATTATTTGG
TTGGATCAAAACTTGGAAATAAAGAAAAAAGTAGAAGGTATAGTAAAAAGCAAACTGACAGAAGGGACTGAAGTAAGCTC
TAACTCAATGAAGGCATTAAACAGTAATCCAGAAAATGCGGTAATTGCTAATGATATAAAAACAGTAGCTTAG

Upstream 100 bases:

>100_bases
GCTAGAGTACGCATGTACTATGCTCCATAATTATTAACACTAGTATTTTGAAAAATTCTACATTTAGAATAATTATGAGG
ACTTATCAATAGATTAAAAA

Downstream 100 bases:

>100_bases
ATTCAGAATGAAATAGTTTTAAGTTAATAAAGTCTCTAGAGCCACTTCCAACAAAGGCTTTAAATATAAACTGATAGTCA
CTCATGTCAAGATTACCCTA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MSFEERRKKDSKESSSKEKDKALNLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVYGPE
SSGKTTLTLHAIAEVQKNGGIAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMALEIVDQLIRSTAVDLVVVDSVAA
LTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRI
QTLKRGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEGENIGQGRDNTIIW
LDQNLEIKKKVEGIVKSKLTEGTEVSSNSMKALNSNPENAVIANDIKTVA

Sequences:

>Translated_370_residues
MSFEERRKKDSKESSSKEKDKALNLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVYGPE
SSGKTTLTLHAIAEVQKNGGIAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMALEIVDQLIRSTAVDLVVVDSVAA
LTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRI
QTLKRGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEGENIGQGRDNTIIW
LDQNLEIKKKVEGIVKSKLTEGTEVSSNSMKALNSNPENAVIANDIKTVA
>Mature_369_residues
SFEERRKKDSKESSSKEKDKALNLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVYGPES
SGKTTLTLHAIAEVQKNGGIAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMALEIVDQLIRSTAVDLVVVDSVAAL
TPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQ
TLKRGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEGENIGQGRDNTIIWL
DQNLEIKKKVEGIVKSKLTEGTEVSSNSMKALNSNPENAVIANDIKTVA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=322, Percent_Identity=63.3540372670807, Blast_Score=415, Evalue=1e-117,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_PROM5 (A2BYU0)

Other databases:

- EMBL:   CP000552
- RefSeq:   YP_001012058.1
- ProteinModelPortal:   A2BYU0
- SMR:   A2BYU0
- STRING:   A2BYU0
- GeneID:   4719827
- GenomeReviews:   CP000552_GR
- KEGG:   pmc:P9515_17441
- eggNOG:   COG0468
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- ProtClustDB:   PRK09354
- BioCyc:   PMAR167542:P9515ORF_1817-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 40058; Mature: 39927

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFEERRKKDSKESSSKEKDKALNLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTL
CCCHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCEEEE
DLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQKNGGIAAFVDAEHALDPVYAASLG
EEEECCCCCCCEEEEEECCCCCCCEEEEEEEEHHHHHCCCEEEEEECHHHCCCHHHHHCC
VDVENLLVSQPDTGEMALEIVDQLIRSTAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQA
CCHHHHEECCCCCHHHHHHHHHHHHHHHHCCEEEECHHHHCCCCHHCCCCCCCCCCCHHH
RLMSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRI
HHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHH
QTLKRGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRG
HHHHCCHHHHCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCHHEEEECCCCCEEEEEC
AWYSYEGENIGQGRDNTIIWLDQNLEIKKKVEGIVKSKLTEGTEVSSNSMKALNSNPENA
CEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCE
VIANDIKTVA
EEECCCCCCC
>Mature Secondary Structure 
SFEERRKKDSKESSSKEKDKALNLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTL
CCHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCEEEE
DLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQKNGGIAAFVDAEHALDPVYAASLG
EEEECCCCCCCEEEEEECCCCCCCEEEEEEEEHHHHHCCCEEEEEECHHHCCCHHHHHCC
VDVENLLVSQPDTGEMALEIVDQLIRSTAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQA
CCHHHHEECCCCCHHHHHHHHHHHHHHHHCCEEEECHHHHCCCCHHCCCCCCCCCCCHHH
RLMSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRI
HHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHH
QTLKRGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRG
HHHHCCHHHHCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCHHEEEECCCCCEEEEEC
AWYSYEGENIGQGRDNTIIWLDQNLEIKKKVEGIVKSKLTEGTEVSSNSMKALNSNPENA
CEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCE
VIANDIKTVA
EEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA