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The map label for this gene is rpmC

Identifier: 123966965

GI number: 123966965

Start: 1524555

End: 1524773

Strand: Reverse

Name: rpmC

Synonym: P9515_17321

Alternate gene names: 123966965

Gene position: 1524773-1524555 (Counterclockwise)

Preceding gene: 123966966

Following gene: 123966964

Centisome position: 89.47

GC content: 25.57

Gene sequence:

>219_bases
ATGAAAAACTCAGAATCTATAAAAGAATTTAAAAAATTAAATTCTTCTGAAATTAATGAAAAAATTGATCAATTACGTAA
AGATCTTTTCGACTTGAGGTTTAAACAAGCGACAAGACAGCTTAATGAAACTCATCAATTTAAAATCATCAAGAAACAAG
TTGCACAATTACTTACACTTAGTAAAAGTCAATCTAATTCTCAAAAATCCTCTGATTAA

Upstream 100 bases:

>100_bases
TACCTGTTAAAACAAAATTTATTTCAAGCGATAAAATTGTAGGTGGTGATTCACCAGTAGAAAAGGCTATTGAGAAAGAA
TCAACAGAGGAGGTTAAAAA

Downstream 100 bases:

>100_bases
TTATTACTATGGCACTTAAAGAAAGAATTGGTACTGTTGTAAGCGACAAAATGGATAAAACAGTTGTTGTCGCCGTTATC
AATAGATATCCTCATCCAAC

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MKNSESIKEFKKLNSSEINEKIDQLRKDLFDLRFKQATRQLNETHQFKIIKKQVAQLLTLSKSQSNSQKSSD

Sequences:

>Translated_72_residues
MKNSESIKEFKKLNSSEINEKIDQLRKDLFDLRFKQATRQLNETHQFKIIKKQVAQLLTLSKSQSNSQKSSD
>Mature_72_residues
MKNSESIKEFKKLNSSEINEKIDQLRKDLFDLRFKQATRQLNETHQFKIIKKQVAQLLTLSKSQSNSQKSSD

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_PROM5 (A2BYS8)

Other databases:

- EMBL:   CP000552
- RefSeq:   YP_001012046.1
- ProteinModelPortal:   A2BYS8
- SMR:   A2BYS8
- STRING:   A2BYS8
- GeneID:   4719814
- GenomeReviews:   CP000552_GR
- KEGG:   pmc:P9515_17321
- HOGENOM:   HBG730819
- OMA:   LNETHKF
- ProtClustDB:   PRK00306
- BioCyc:   PMAR167542:P9515ORF_1804-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 8470; Mature: 8470

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSESIKEFKKLNSSEINEKIDQLRKDLFDLRFKQATRQLNETHQFKIIKKQVAQLLTL
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKSQSNSQKSSD
HHHCCCCCCCCC
>Mature Secondary Structure
MKNSESIKEFKKLNSSEINEKIDQLRKDLFDLRFKQATRQLNETHQFKIIKKQVAQLLTL
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKSQSNSQKSSD
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA