| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966939
Identifier: 123966939
GI number: 123966939
Start: 1507246
End: 1508202
Strand: Direct
Name: 123966939
Synonym: P9515_17061
Alternate gene names: NA
Gene position: 1507246-1508202 (Clockwise)
Preceding gene: 123966938
Following gene: 123966943
Centisome position: 88.44
GC content: 26.02
Gene sequence:
>957_bases ATGAAAAATTCCTATGATATTGTAACTTGCATTAGTAACAATCACTTAGAAATTGGAATTCGCGCTATTAGGTCCTTAAT TGAATTATCTGAAGCGAAGAGGATATTTATAATTACTCCTAAAAAAAATATAAATTTTTTCAAACAAAATTTTCCTAAAG AGAATTCATTAATTATTCTTGATGAGGATAAAATAATTCCCAATATAAAACTAACTGATGTTGCCAATACTCTTAGAGAA TATGGAGGTAAGGCAGAGAGAGCAGGTTGGTATTTTCAACAATTCTTGAAAATGAATATTTCAAGGTATCCCAACTTATC AGAATATTATTTAATTTGGGATTCAGATACCGTTATGCTAAAAAAAATTAAATTCTTCGACGAATCAAATAAATTAATTA TTAATACGAGCAAAGAATTTCATAAACCCTATTTTCAAACCATAAAAAATTTTGGTCTACTTAAAACAAATAACTTCTCT TTTATTAGCGAGCATATGCTAATTAATTCAAAGATAATGAATGATTTAATATCTTTAATAGAAAAAGCGAATTCTAAAAA TCTTTCTTGGGTAAAAACTGTAATAAGTCAAATTAATAAAGAGCATTTAAACGAAACCGGAAGTGGTTTTAGTGAATTTG AGACATATGGTACCTATTTATCTAAATATCACCCCAATTCTTTTGTGACAAATAAATTGAAATCCTGCAGAAATACTTAT TCCTTATTTGGCAAACACAATCAAATTAATACATTCTTAATTTTGAGATTTTACGGCTATTATTGGGCATCATTCGAGAA CTGGGATTTAAAAACTCAAAATTTCAAAAATTTGAGATTAATTCGTATTTTTAACAATCTTGTAGCTAATTTTTTAATTA TTTTTATTAACATCACAAATTCATACAAACATAACTTTGAATTTTCAAGATATCTTGCAATGCCACTTTTAAAATAA
Upstream 100 bases:
>100_bases CAAATTTTCAACTTTAGAAATCAATTATGTTTTAACTTTTTTTCAGAACTTAATTTTCCACTAATATTAAGAACATTAGT TTAAAAATACCTCTTAATAA
Downstream 100 bases:
>100_bases AAATTAATATTGTAATTAAAAATTCCTCACTCACCAATCTACCCACCAGTACTTAATTTTTATTCAAAGACAGAAATTTT TACTTGCCATAATTATCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKNSYDIVTCISNNHLEIGIRAIRSLIELSEAKRIFIITPKKNINFFKQNFPKENSLIILDEDKIIPNIKLTDVANTLRE YGGKAERAGWYFQQFLKMNISRYPNLSEYYLIWDSDTVMLKKIKFFDESNKLIINTSKEFHKPYFQTIKNFGLLKTNNFS FISEHMLINSKIMNDLISLIEKANSKNLSWVKTVISQINKEHLNETGSGFSEFETYGTYLSKYHPNSFVTNKLKSCRNTY SLFGKHNQINTFLILRFYGYYWASFENWDLKTQNFKNLRLIRIFNNLVANFLIIFINITNSYKHNFEFSRYLAMPLLK
Sequences:
>Translated_318_residues MKNSYDIVTCISNNHLEIGIRAIRSLIELSEAKRIFIITPKKNINFFKQNFPKENSLIILDEDKIIPNIKLTDVANTLRE YGGKAERAGWYFQQFLKMNISRYPNLSEYYLIWDSDTVMLKKIKFFDESNKLIINTSKEFHKPYFQTIKNFGLLKTNNFS FISEHMLINSKIMNDLISLIEKANSKNLSWVKTVISQINKEHLNETGSGFSEFETYGTYLSKYHPNSFVTNKLKSCRNTY SLFGKHNQINTFLILRFYGYYWASFENWDLKTQNFKNLRLIRIFNNLVANFLIIFINITNSYKHNFEFSRYLAMPLLK >Mature_318_residues MKNSYDIVTCISNNHLEIGIRAIRSLIELSEAKRIFIITPKKNINFFKQNFPKENSLIILDEDKIIPNIKLTDVANTLRE YGGKAERAGWYFQQFLKMNISRYPNLSEYYLIWDSDTVMLKKIKFFDESNKLIINTSKEFHKPYFQTIKNFGLLKTNNFS FISEHMLINSKIMNDLISLIEKANSKNLSWVKTVISQINKEHLNETGSGFSEFETYGTYLSKYHPNSFVTNKLKSCRNTY SLFGKHNQINTFLILRFYGYYWASFENWDLKTQNFKNLRLIRIFNNLVANFLIIFINITNSYKHNFEFSRYLAMPLLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37658; Mature: 37658
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSYDIVTCISNNHLEIGIRAIRSLIELSEAKRIFIITPKKNINFFKQNFPKENSLIIL CCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCCCEEEE DEDKIIPNIKLTDVANTLREYGGKAERAGWYFQQFLKMNISRYPNLSEYYLIWDSDTVML ECCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE KKIKFFDESNKLIINTSKEFHKPYFQTIKNFGLLKTNNFSFISEHMLINSKIMNDLISLI HHHHHCCCCCEEEEECCHHHCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHH EKANSKNLSWVKTVISQINKEHLNETGSGFSEFETYGTYLSKYHPNSFVTNKLKSCRNTY HHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SLFGKHNQINTFLILRFYGYYWASFENWDLKTQNFKNLRLIRIFNNLVANFLIIFINITN HHHCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECC SYKHNFEFSRYLAMPLLK CCCCCCCHHHHHHCCCCC >Mature Secondary Structure MKNSYDIVTCISNNHLEIGIRAIRSLIELSEAKRIFIITPKKNINFFKQNFPKENSLIIL CCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCCCEEEE DEDKIIPNIKLTDVANTLREYGGKAERAGWYFQQFLKMNISRYPNLSEYYLIWDSDTVML ECCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE KKIKFFDESNKLIINTSKEFHKPYFQTIKNFGLLKTNNFSFISEHMLINSKIMNDLISLI HHHHHCCCCCEEEEECCHHHCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHH EKANSKNLSWVKTVISQINKEHLNETGSGFSEFETYGTYLSKYHPNSFVTNKLKSCRNTY HHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SLFGKHNQINTFLILRFYGYYWASFENWDLKTQNFKNLRLIRIFNNLVANFLIIFINITN HHHCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECC SYKHNFEFSRYLAMPLLK CCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA