| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is spr [C]
Identifier: 123966931
GI number: 123966931
Start: 1496243
End: 1496998
Strand: Direct
Name: spr [C]
Synonym: P9515_16981
Alternate gene names: 123966931
Gene position: 1496243-1496998 (Clockwise)
Preceding gene: 123966929
Following gene: 123966933
Centisome position: 87.8
GC content: 26.46
Gene sequence:
>756_bases ATGAAAAAAAATATAGACCCTATCTCACTATTTAAGCAAACTAATTTTTCTAATACTATTTGGTGGGAAGTAAAAATTAA TATTTCTGGATATCAAAATGAAACTGAAAATAATTTAGTAACGGAAATATTCAAAAATAGAATTTTCAAGCTTATTTATC CAACTCCATATCAAAGTAAAAAAAGATTATCTAGGATATTAGTTCAATTTTATGAAGATGGTTATATCTGCTGGATTGAT TTAGATAAATTAATTATTGAGAAATTCAATTTTAATAACAGTTTCATCAAATCTGATGAAATATTTATACGAGAAAAAAT TCCATTGGTTCTTAATTGGATCAAAAATCAATCTAAGTTAAAAAATCAATATCTTTGGGGTGGAACAATAGGTCCTAATT TTGACTGTTCAGGATTAATTCAAACGGCATTTCTAAATTATGGAATTTATATACCTAGAGACTCATATCAAATAAAAAGT TTTTGTCGGCATCTTTTTAATTTTACAGAAATCAAATATTCACTCGAAAAAGGCGATATTTTATTTTTTGGTAATAGCAA AAAATGCGATCATGTTGGAATTTATAAAGGAGAGGGATTGTATTACCATTGTTCAGGTAATGATTTCGGAAGAAATGGTA TAGGAATAGATACTCTAAAAAAGACTAATGACAGAATTTCTCTTCATTATCAATCAAAACTGATTTCTGCAGGAAGAATA TTCAGATCTTTCAGATGGGATAAAACTATTAGATGA
Upstream 100 bases:
>100_bases TATCTTTTTTTGAATATTCTTTATTGTTAAAACAAACTCTGTCTAGAATATCATTTAATGCTAGACCCATTTCTTCTCGC AAATAATAAAAAGACATTCT
Downstream 100 bases:
>100_bases AAGTTTATATTAGATTTTTGACTTTTTTATTATTTCCTAGTGAATTTAACCTGCAGTCCAAATATTTTTAATAATTGGCA TTATGGTATCTAAATGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKKNIDPISLFKQTNFSNTIWWEVKINISGYQNETENNLVTEIFKNRIFKLIYPTPYQSKKRLSRILVQFYEDGYICWID LDKLIIEKFNFNNSFIKSDEIFIREKIPLVLNWIKNQSKLKNQYLWGGTIGPNFDCSGLIQTAFLNYGIYIPRDSYQIKS FCRHLFNFTEIKYSLEKGDILFFGNSKKCDHVGIYKGEGLYYHCSGNDFGRNGIGIDTLKKTNDRISLHYQSKLISAGRI FRSFRWDKTIR
Sequences:
>Translated_251_residues MKKNIDPISLFKQTNFSNTIWWEVKINISGYQNETENNLVTEIFKNRIFKLIYPTPYQSKKRLSRILVQFYEDGYICWID LDKLIIEKFNFNNSFIKSDEIFIREKIPLVLNWIKNQSKLKNQYLWGGTIGPNFDCSGLIQTAFLNYGIYIPRDSYQIKS FCRHLFNFTEIKYSLEKGDILFFGNSKKCDHVGIYKGEGLYYHCSGNDFGRNGIGIDTLKKTNDRISLHYQSKLISAGRI FRSFRWDKTIR >Mature_251_residues MKKNIDPISLFKQTNFSNTIWWEVKINISGYQNETENNLVTEIFKNRIFKLIYPTPYQSKKRLSRILVQFYEDGYICWID LDKLIIEKFNFNNSFIKSDEIFIREKIPLVLNWIKNQSKLKNQYLWGGTIGPNFDCSGLIQTAFLNYGIYIPRDSYQIKS FCRHLFNFTEIKYSLEKGDILFFGNSKKCDHVGIYKGEGLYYHCSGNDFGRNGIGIDTLKKTNDRISLHYQSKLISAGRI FRSFRWDKTIR
Specific function: Unknown
COG id: COG0791
COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29711; Mature: 29711
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNIDPISLFKQTNFSNTIWWEVKINISGYQNETENNLVTEIFKNRIFKLIYPTPYQSK CCCCCCHHHHHECCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHCCEEEEEECCCCHHH KRLSRILVQFYEDGYICWIDLDKLIIEKFNFNNSFIKSDEIFIREKIPLVLNWIKNQSKL HHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCCEECCCCEEEECCCHHHHHHHHCHHHH KNQYLWGGTIGPNFDCSGLIQTAFLNYGIYIPRDSYQIKSFCRHLFNFTEIKYSLEKGDI HHEEEECCCCCCCCCHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCHHHEEEEECCCCE LFFGNSKKCDHVGIYKGEGLYYHCSGNDFGRNGIGIDTLKKTNDRISLHYQSKLISAGRI EEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEECCCCEEEEEEHHHHHHHHHH FRSFRWDKTIR HHHHCCCCCCC >Mature Secondary Structure MKKNIDPISLFKQTNFSNTIWWEVKINISGYQNETENNLVTEIFKNRIFKLIYPTPYQSK CCCCCCHHHHHECCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHCCEEEEEECCCCHHH KRLSRILVQFYEDGYICWIDLDKLIIEKFNFNNSFIKSDEIFIREKIPLVLNWIKNQSKL HHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCCEECCCCEEEECCCHHHHHHHHCHHHH KNQYLWGGTIGPNFDCSGLIQTAFLNYGIYIPRDSYQIKSFCRHLFNFTEIKYSLEKGDI HHEEEECCCCCCCCCHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCHHHEEEEECCCCE LFFGNSKKCDHVGIYKGEGLYYHCSGNDFGRNGIGIDTLKKTNDRISLHYQSKLISAGRI EEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEECCCCEEEEEEHHHHHHHHHH FRSFRWDKTIR HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA