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The map label for this gene is rimP

Identifier: 123966904

GI number: 123966904

Start: 1465550

End: 1466017

Strand: Direct

Name: rimP

Synonym: P9515_16711

Alternate gene names: 123966904

Gene position: 1465550-1466017 (Clockwise)

Preceding gene: 123966901

Following gene: 123966905

Centisome position: 86.0

GC content: 26.71

Gene sequence:

>468_bases
TTGGATAAAGAACTAAAAAACAATTTAGAAATTCTTCTTGAGGAAGTTGCTAAGGAATTTAATCTGAAGGTTTATAGTTT
AAATTTACTGACAAATCAAAACCCAATAATTATAAAAATTATCATTAAAAAAACAAACGAAGAAGATATTACTATAGAGG
ATTGTTCAAGATTCAATAACCCTGCATCTGCTGTTATTGAAAATTCAAATCTTTTAAAATGTTCATATGTTCTAGAAATT
AGTAGTCAAGGGGTCAGTGATGAATTAACCTCAGAAAGAGACTTCAAAACCTTTAAAGGTTTTCCAGTTAATGTAGAGTT
AAACCAAAAAAATTCACGTATCAAATTATTGAATGGTTTACTTTATGAAAAGTCTAAAGATTATTTAGCCATTAACATAA
AAGGTAAGATAAAAAAAATCCCCTTTAATGAAGTATTAAAGATTAGTCTTTGCACTAGACAAGACTAA

Upstream 100 bases:

>100_bases
TTTTTGTTTACATCCATAAAATACATTGATAAAAAATTTCAAAAAAGCATTTTCATATGTGAAGATAGTAAATAATTAAA
AAAATTCGTATCTGGATATA

Downstream 100 bases:

>100_bases
TAAACTTTTCAACCATTATTCATTTTACCCATCATAGATGGCATTAGTAATTCTCCCAGGATTGAACAATCTAATTGAAG
ACATTAGTGAGGAAAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MDKELKNNLEILLEEVAKEFNLKVYSLNLLTNQNPIIIKIIIKKTNEEDITIEDCSRFNNPASAVIENSNLLKCSYVLEI
SSQGVSDELTSERDFKTFKGFPVNVELNQKNSRIKLLNGLLYEKSKDYLAINIKGKIKKIPFNEVLKISLCTRQD

Sequences:

>Translated_155_residues
MDKELKNNLEILLEEVAKEFNLKVYSLNLLTNQNPIIIKIIIKKTNEEDITIEDCSRFNNPASAVIENSNLLKCSYVLEI
SSQGVSDELTSERDFKTFKGFPVNVELNQKNSRIKLLNGLLYEKSKDYLAINIKGKIKKIPFNEVLKISLCTRQD
>Mature_155_residues
MDKELKNNLEILLEEVAKEFNLKVYSLNLLTNQNPIIIKIIIKKTNEEDITIEDCSRFNNPASAVIENSNLLKCSYVLEI
SSQGVSDELTSERDFKTFKGFPVNVELNQKNSRIKLLNGLLYEKSKDYLAINIKGKIKKIPFNEVLKISLCTRQD

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_PROM5 (A2BYL7)

Other databases:

- EMBL:   CP000552
- RefSeq:   YP_001011985.1
- ProteinModelPortal:   A2BYL7
- SMR:   A2BYL7
- STRING:   A2BYL7
- GeneID:   4720474
- GenomeReviews:   CP000552_GR
- KEGG:   pmc:P9515_16711
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   AYVLEIS
- ProtClustDB:   PRK14646
- BioCyc:   PMAR167542:P9515ORF_1742-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17782; Mature: 17782

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKELKNNLEILLEEVAKEFNLKVYSLNLLTNQNPIIIKIIIKKTNEEDITIEDCSRFNN
CCCHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCEEEEEEEEECCCCCEEHHHHHCCCC
PASAVIENSNLLKCSYVLEISSQGVSDELTSERDFKTFKGFPVNVELNQKNSRIKLLNGL
CCCEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCEEEEEHHH
LYEKSKDYLAINIKGKIKKIPFNEVLKISLCTRQD
HCCCCCCEEEEEECCEEEECCCCCEEEEEEEECCC
>Mature Secondary Structure
MDKELKNNLEILLEEVAKEFNLKVYSLNLLTNQNPIIIKIIIKKTNEEDITIEDCSRFNN
CCCHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCEEEEEEEEECCCCCEEHHHHHCCCC
PASAVIENSNLLKCSYVLEISSQGVSDELTSERDFKTFKGFPVNVELNQKNSRIKLLNGL
CCCEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCEEEEEHHH
LYEKSKDYLAINIKGKIKKIPFNEVLKISLCTRQD
HCCCCCCEEEEEECCEEEECCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA