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The map label for this gene is ccdA

Identifier: 123966871

GI number: 123966871

Start: 1430865

End: 1431521

Strand: Direct

Name: ccdA

Synonym: P9515_16381

Alternate gene names: NA

Gene position: 1430865-1431521 (Clockwise)

Preceding gene: 123966870

Following gene: 123966872

Centisome position: 83.96

GC content: 34.09

Gene sequence:

>657_bases
ATGGAGCAAGGGCTTAATAATCCAGGCCCGTTTACAATATTTTTGGTATTTACAGCAGGCCTTTTAACCAGTCTTGGCCC
ATGTTCTTTATCTTTACTGCCAATCACAATTGCGTATATTGGTGGAACAAAGAAAAATAAATTTAAACTTATAAGTTTTT
CTGGCGGAGTTATTTTTTCGCTAGTTACTTTAGGAGCATTAAGTGGATTCTTAGGGAAAATATATGGTCAATTACCCTCT
TATTACTCTTCTTTAGTTGCTTTCATAGCAATAATTATGGGTCTAAATTTATTAGGAATTTTAAAATTCCAATTACCAAA
TGGGCCCGACTTAAGATTTATGGAAGATAAGGTGCCTCCTTTAATAACACCTTTTCTGATAGGTGGAACTTTTGGTCTCG
CTTCCTCACCATGCATTACTCCAGTACTGGCTACACTATTAGCTTGGGTATCGCAAGCAAAAAACCCCACAATTTCAATA
ATCTTTTTGTTCTTCTTTGGACTAGGTCAAATAACACCCTTAATACTTGCGGGGGCAACAACTGAAAATCTAAAGCAGTT
TCTAGAACTCAGAAAATATAGTCAAATAATTCCTACTTTAAGTGGAGTATTTTTAGTTTCTGTAGGAATTTTAAATTTAA
TTTCAAATTGGATTTAA

Upstream 100 bases:

>100_bases
GAAAGTCTCTTAATTAGTTAGAATTTAAGAGATTTAGATTCTTGTCATCACATCTATTAATTTAGTTATTTCAGAATTAG
CTCAAAAAGGTAATTTACTA

Downstream 100 bases:

>100_bases
ATGATTATTTTTAAGAATTTGATTTTAAAAATATCAAGTTTAAAATTTGCTATTACATTAATAATTTTCATTGCTATTAC
AAGTGGTGTTGGAACATTTA

Product: putative c-type cytochrome biogenesis protein CcdA

Products: NA

Alternate protein names: C-Type Cytochrome Biogenesis Protein CcdA; Cytochrome C Biogenesis Protein; C-Type Cytochrome Biogenesis Protein; Cytochrome C-Type Biogenesis Protein CcdA; Cytochrome C Biogenesis Membrane Protein; Cytochrome C Biogenesis Protein CcdA; Cytochrome C Biogenesis Protein-Like; Thioredoxin Domain-Containing Protein; CytoChrome C Biogenesis Protein; ThiolDisulfide Interchange Protein; CytoChrome C-Type Biogenesis Protein CcdA; C-Type Cytochrome Biogenesis; ThiolDisulfide Interchange Protein DsbD

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MEQGLNNPGPFTIFLVFTAGLLTSLGPCSLSLLPITIAYIGGTKKNKFKLISFSGGVIFSLVTLGALSGFLGKIYGQLPS
YYSSLVAFIAIIMGLNLLGILKFQLPNGPDLRFMEDKVPPLITPFLIGGTFGLASSPCITPVLATLLAWVSQAKNPTISI
IFLFFFGLGQITPLILAGATTENLKQFLELRKYSQIIPTLSGVFLVSVGILNLISNWI

Sequences:

>Translated_218_residues
MEQGLNNPGPFTIFLVFTAGLLTSLGPCSLSLLPITIAYIGGTKKNKFKLISFSGGVIFSLVTLGALSGFLGKIYGQLPS
YYSSLVAFIAIIMGLNLLGILKFQLPNGPDLRFMEDKVPPLITPFLIGGTFGLASSPCITPVLATLLAWVSQAKNPTISI
IFLFFFGLGQITPLILAGATTENLKQFLELRKYSQIIPTLSGVFLVSVGILNLISNWI
>Mature_218_residues
MEQGLNNPGPFTIFLVFTAGLLTSLGPCSLSLLPITIAYIGGTKKNKFKLISFSGGVIFSLVTLGALSGFLGKIYGQLPS
YYSSLVAFIAIIMGLNLLGILKFQLPNGPDLRFMEDKVPPLITPFLIGGTFGLASSPCITPVLATLLAWVSQAKNPTISI
IFLFFFGLGQITPLILAGATTENLKQFLELRKYSQIIPTLSGVFLVSVGILNLISNWI

Specific function: Unknown

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23362; Mature: 23362

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQGLNNPGPFTIFLVFTAGLLTSLGPCSLSLLPITIAYIGGTKKNKFKLISFSGGVIFS
CCCCCCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHH
LVTLGALSGFLGKIYGQLPSYYSSLVAFIAIIMGLNLLGILKFQLPNGPDLRFMEDKVPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCC
LITPFLIGGTFGLASSPCITPVLATLLAWVSQAKNPTISIIFLFFFGLGQITPLILAGAT
HHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
TENLKQFLELRKYSQIIPTLSGVFLVSVGILNLISNWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEQGLNNPGPFTIFLVFTAGLLTSLGPCSLSLLPITIAYIGGTKKNKFKLISFSGGVIFS
CCCCCCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHH
LVTLGALSGFLGKIYGQLPSYYSSLVAFIAIIMGLNLLGILKFQLPNGPDLRFMEDKVPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCC
LITPFLIGGTFGLASSPCITPVLATLLAWVSQAKNPTISIIFLFFFGLGQITPLILAGAT
HHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
TENLKQFLELRKYSQIIPTLSGVFLVSVGILNLISNWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA