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The map label for this gene is atpB [H]

Identifier: 123966868

GI number: 123966868

Start: 1428031

End: 1428597

Strand: Reverse

Name: atpB [H]

Synonym: P9515_16351

Alternate gene names: 123966868

Gene position: 1428597-1428031 (Counterclockwise)

Preceding gene: 123966869

Following gene: 123966867

Centisome position: 83.83

GC content: 35.8

Gene sequence:

>567_bases
ATGGAAAATGATCCTAAAGGATTGCAAAATTTACTTGAATTTTTATGGGACTATATTAGAGATCTTGCAAGAACTCAAAT
TGGTGAAAAAGTTTATAGAGATTGGATGCCTTTTATCGGAACTCTATTCTTATTTGTGTTTGTTAGTAATTGGGGAGGGG
CGCTTATACCTTGGAGATTAATAAAGTTACCAAGTGGAGAATTAGGAGCTCCGACAGCTGATATTAATACAACTATTGCA
CTGGCCTTGTTAGTATCTTTATCTTATTTCTATGCTGGTTTAAGCAATAAGGGCTGGAGATACTTCGAATATTATGTTCA
TCCAACACCGATAATGCTACCTTTTAAAATTTTAGAAGACTTTACCAAACCCTTATCATTATCTTTCAGGCTTTTTGGGA
ATATTCTTGCTGATGAACTTGTAGTTGGTGTTTTGGTTTTCCTGGTTCCCCTAGTTTTACCAATTCCTGTAATGTTTCTT
GGGTTGTTTACAAGTGCAATCCAAGCATTAATCTTCGCTACACTTGCTGCTTACTACATAGGAGAAGCGGTAGAGGAACA
TCATTAG

Upstream 100 bases:

>100_bases
TTGGCAAATTGGAAATATAAGACTTCATGGACAAGTTTTTTTAACTTCTTGGATCCTATTAGGTTCATTATTAGTTTTTA
TCTCTTTAGGGACGAAAAAA

Downstream 100 bases:

>100_bases
CATCTTTTAAATACATTCAGACTCTTTTACAAAGGGCCTGTAATCTGGCAAAATATTTAATCGCGTAGGTCTGAAAAATT
CAGACCCATTCTTAAAAAAG

Product: F0F1 ATP synthase subunit A

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F0 sector subunit a; F-ATPase subunit 6 [H]

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MENDPKGLQNLLEFLWDYIRDLARTQIGEKVYRDWMPFIGTLFLFVFVSNWGGALIPWRLIKLPSGELGAPTADINTTIA
LALLVSLSYFYAGLSNKGWRYFEYYVHPTPIMLPFKILEDFTKPLSLSFRLFGNILADELVVGVLVFLVPLVLPIPVMFL
GLFTSAIQALIFATLAAYYIGEAVEEHH

Sequences:

>Translated_188_residues
MENDPKGLQNLLEFLWDYIRDLARTQIGEKVYRDWMPFIGTLFLFVFVSNWGGALIPWRLIKLPSGELGAPTADINTTIA
LALLVSLSYFYAGLSNKGWRYFEYYVHPTPIMLPFKILEDFTKPLSLSFRLFGNILADELVVGVLVFLVPLVLPIPVMFL
GLFTSAIQALIFATLAAYYIGEAVEEHH
>Mature_188_residues
MENDPKGLQNLLEFLWDYIRDLARTQIGEKVYRDWMPFIGTLFLFVFVSNWGGALIPWRLIKLPSGELGAPTADINTTIA
LALLVSLSYFYAGLSNKGWRYFEYYVHPTPIMLPFKILEDFTKPLSLSFRLFGNILADELVVGVLVFLVPLVLPIPVMFL
GLFTSAIQALIFATLAAYYIGEAVEEHH

Specific function: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane [H]

COG id: COG0356

COG function: function code C; F0F1-type ATP synthase, subunit a

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase A chain family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6226527, Length=197, Percent_Identity=28.4263959390863, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000568
- InterPro:   IPR023011 [H]

Pfam domain/function: PF00119 ATP-synt_A [H]

EC number: 3.6.3.14

Molecular weight: Translated: 21323; Mature: 21323

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00449 ATPASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENDPKGLQNLLEFLWDYIRDLARTQIGEKVYRDWMPFIGTLFLFVFVSNWGGALIPWRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IKLPSGELGAPTADINTTIALALLVSLSYFYAGLSNKGWRYFEYYVHPTPIMLPFKILED
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHH
FTKPLSLSFRLFGNILADELVVGVLVFLVPLVLPIPVMFLGLFTSAIQALIFATLAAYYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEAVEEHH
HHHHHHCC
>Mature Secondary Structure
MENDPKGLQNLLEFLWDYIRDLARTQIGEKVYRDWMPFIGTLFLFVFVSNWGGALIPWRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IKLPSGELGAPTADINTTIALALLVSLSYFYAGLSNKGWRYFEYYVHPTPIMLPFKILED
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHH
FTKPLSLSFRLFGNILADELVVGVLVFLVPLVLPIPVMFLGLFTSAIQALIFATLAAYYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEAVEEHH
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA