| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966832
Identifier: 123966832
GI number: 123966832
Start: 1400267
End: 1400803
Strand: Direct
Name: 123966832
Synonym: P9515_15991
Alternate gene names: NA
Gene position: 1400267-1400803 (Clockwise)
Preceding gene: 123966831
Following gene: 123966833
Centisome position: 82.17
GC content: 38.73
Gene sequence:
>537_bases ATGAAACCTCTTTTATCCTCTTTAATTAGATTCTGCCAAAAAGAACTTGATAAAGGTCGATATACCCAACCAAGTTGTAA AAGATGGCAGCCGTTACTCTCTTTTATAGGGGGATTAATTGCGATAAGTTGCCTAGGAATAATTAGCAATTTATCTAACT ACTCTCTACTTGTTGCACCTTTTGGAGCTTCTACCGTTCTTTTGTTTGCCGCTCCCAATAGCCCTTTAGCTCAGCCAAGA AATCTTGTTTTTGGAAATTTAACAGGAGCTATCTCTGCAGTTCTTTGTGTCTTTTTAATAGGAACGTCTCCCTTAGCAAG TGGTATAGCAGTTGGACTGGCTATTGCTCTTGGTCAAGCTTTTCGATGTTTACATCCACCGGCTGGCGCAGTTGCATTAC TGGGCGTCTTGCTAAAAGCATCACCTATTTTTATTTTAATTCCTGTCCTTTCTGGTTCACTAATATTATTAGTTATTGCC TTTTGCTTTCATCGTCTTCAAAAAAGAGAACAGTCTTATCCATTGCATTGGCTGTAA
Upstream 100 bases:
>100_bases CAGCTATATCTATTTAGAAATAGTATTTTCAACCTTTTGGAATCTCGGTATCATTGCTTTGGGAACAATGAATTCAATAA TTTAATTATCTAAAAAAATA
Downstream 100 bases:
>100_bases ATATCTAAAGATAAGTCATAGAAAAAAATCTCAAAGATTTAAATCTAAGTATGTGGTGGTAATAGTTAAGGATATAACTT GTGAAAAAGATTATTTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: HPP Family Protein+B; CBS Domain-Containing Protein; CBS Domain Containing Membrane Protein; HPP Family Membrane Protein; Cbs Domain Containing Membrane Protein; Transmembrane Protein; CBS-Domain-Containing Membrane Protein; HPP Domain-Containing Protein; Conserved Protein; HPP Domain Protein
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKPLLSSLIRFCQKELDKGRYTQPSCKRWQPLLSFIGGLIAISCLGIISNLSNYSLLVAPFGASTVLLFAAPNSPLAQPR NLVFGNLTGAISAVLCVFLIGTSPLASGIAVGLAIALGQAFRCLHPPAGAVALLGVLLKASPIFILIPVLSGSLILLVIA FCFHRLQKREQSYPLHWL
Sequences:
>Translated_178_residues MKPLLSSLIRFCQKELDKGRYTQPSCKRWQPLLSFIGGLIAISCLGIISNLSNYSLLVAPFGASTVLLFAAPNSPLAQPR NLVFGNLTGAISAVLCVFLIGTSPLASGIAVGLAIALGQAFRCLHPPAGAVALLGVLLKASPIFILIPVLSGSLILLVIA FCFHRLQKREQSYPLHWL >Mature_178_residues MKPLLSSLIRFCQKELDKGRYTQPSCKRWQPLLSFIGGLIAISCLGIISNLSNYSLLVAPFGASTVLLFAAPNSPLAQPR NLVFGNLTGAISAVLCVFLIGTSPLASGIAVGLAIALGQAFRCLHPPAGAVALLGVLLKASPIFILIPVLSGSLILLVIA FCFHRLQKREQSYPLHWL
Specific function: Unknown
COG id: COG3448
COG function: function code T; CBS-domain-containing membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18978; Mature: 18978
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLLSSLIRFCQKELDKGRYTQPSCKRWQPLLSFIGGLIAISCLGIISNLSNYSLLVAP CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE FGASTVLLFAAPNSPLAQPRNLVFGNLTGAISAVLCVFLIGTSPLASGIAVGLAIALGQA CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FRCLHPPAGAVALLGVLLKASPIFILIPVLSGSLILLVIAFCFHRLQKREQSYPLHWL HHHCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKPLLSSLIRFCQKELDKGRYTQPSCKRWQPLLSFIGGLIAISCLGIISNLSNYSLLVAP CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE FGASTVLLFAAPNSPLAQPRNLVFGNLTGAISAVLCVFLIGTSPLASGIAVGLAIALGQA CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FRCLHPPAGAVALLGVLLKASPIFILIPVLSGSLILLVIAFCFHRLQKREQSYPLHWL HHHCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA