Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966817

Identifier: 123966817

GI number: 123966817

Start: 1392711

End: 1393115

Strand: Reverse

Name: 123966817

Synonym: P9515_15841

Alternate gene names: NA

Gene position: 1393115-1392711 (Counterclockwise)

Preceding gene: 123966819

Following gene: 123966816

Centisome position: 81.75

GC content: 33.33

Gene sequence:

>405_bases
ATGACACAAGCGAAACTCGAAGAATTACTCAAGATAGATAACGAATCGTACAACCTTTTAAGAGTTCTACATATGTTCAT
GAAGTTAGATAATACTCAGGAAGTGCCATTACAATCAATGGCTGTATTTTGGTATGTAGCTACTTATCAAAAGTGTAGTA
AAAAGGATATAGAAGATCACTTCAAAATGAGCAAAGCTAGTGCCTCAAGGATGACGGACTATATAAGCAGATATCATAGA
CTAGGTAAGCCAGGCTTAGGTTTAGTTTCTAAAGAACAAGATCCAAATGATAGAAGAAGAACACTTTTGAAACTTACTAG
GAAAGGTAAGGATTTAATAGAAAAGTCTTTCAGTACTCTTTATGAGGATGTAAAAGATTTCAATGAGATTGATTTTGAAG
AATGA

Upstream 100 bases:

>100_bases
AACTATAAATAGATTACAAATGATCCATGCATGGATCTAAACGTATAAAACGAATTATATAGTTTAGTATGATAATGATA
GAAAGAAGAGTTTATCAGAG

Downstream 100 bases:

>100_bases
ACACTCGTAATTTTATTAATTAAGTAAATTTTATGAAATTCCTAAAAATATAAGTCATTTCCAAAATGATTTTGTAAATT
CGAAAGTTATTGTTTTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTQAKLEELLKIDNESYNLLRVLHMFMKLDNTQEVPLQSMAVFWYVATYQKCSKKDIEDHFKMSKASASRMTDYISRYHR
LGKPGLGLVSKEQDPNDRRRTLLKLTRKGKDLIEKSFSTLYEDVKDFNEIDFEE

Sequences:

>Translated_134_residues
MTQAKLEELLKIDNESYNLLRVLHMFMKLDNTQEVPLQSMAVFWYVATYQKCSKKDIEDHFKMSKASASRMTDYISRYHR
LGKPGLGLVSKEQDPNDRRRTLLKLTRKGKDLIEKSFSTLYEDVKDFNEIDFEE
>Mature_133_residues
TQAKLEELLKIDNESYNLLRVLHMFMKLDNTQEVPLQSMAVFWYVATYQKCSKKDIEDHFKMSKASASRMTDYISRYHRL
GKPGLGLVSKEQDPNDRRRTLLKLTRKGKDLIEKSFSTLYEDVKDFNEIDFEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15862; Mature: 15731

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS00732 RIBOSOMAL_S16

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAKLEELLKIDNESYNLLRVLHMFMKLDNTQEVPLQSMAVFWYVATYQKCSKKDIEDH
CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FKMSKASASRMTDYISRYHRLGKPGLGLVSKEQDPNDRRRTLLKLTRKGKDLIEKSFSTL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YEDVKDFNEIDFEE
HHHHHHHHCCCCCC
>Mature Secondary Structure 
TQAKLEELLKIDNESYNLLRVLHMFMKLDNTQEVPLQSMAVFWYVATYQKCSKKDIEDH
CHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FKMSKASASRMTDYISRYHRLGKPGLGLVSKEQDPNDRRRTLLKLTRKGKDLIEKSFSTL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YEDVKDFNEIDFEE
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA