Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123966811

Identifier: 123966811

GI number: 123966811

Start: 1389127

End: 1389759

Strand: Direct

Name: 123966811

Synonym: P9515_15781

Alternate gene names: NA

Gene position: 1389127-1389759 (Clockwise)

Preceding gene: 123966809

Following gene: 123966818

Centisome position: 81.51

GC content: 35.39

Gene sequence:

>633_bases
ATGAAACTAATTGGGAAATATAAAAATTCAGGATTTGAGGCTGTAGCTGATGGTGTGATTTCTTTCTTTGATAGACGAGA
AGACTTACATACTAATGGTATCGCTTTTGGGCAAAACATCTCCTTAAATAATGATCCTTATAAAGTTTCAACAGATATTA
GTCTTGTTTCTATAGACAGATCGGACCCAGAAGCTTTTGCAATATCTGAAGTCATAATTAGAGGGGTTAATGCAGGACTA
AAAAAATATCTGGAAGATCACTCATTAATTAGAGAATGCTGCCCAGAACAATCTTTATTTGTTAACCCAATATTTAATTT
ACAACGTTATGCACCAGGAGAAGGATTTAAAAAATGGCATTGTGATTGGACTATTAGTAATGAAGCAACGGAACCTGTAC
ATAGAGTCTTAGCTTGGATTCTTTATTGTAATGATGTGGATTCAGGCGGAACTGAGTTTCTTTGGCAGAAACATCATGAA
GCTGCTGAAAGGGGTAAACTTATTATCTTCCCCGCGGGGATATCTCACATACATCGAGGAAGAGTAAACAAAAAAGATAT
AAAAACTATTGCAACTGGTTGGATAAATGCTGGTAATTTTGAAGACTACATTTCACGATTAGCAAGCTCCTAA

Upstream 100 bases:

>100_bases
TTCCATTTGTTTACATTAAATAGATAGATAATTAAAATAAATAGTTAACTGAAAGATATGATTAAAGGATAATTTATATT
TTTAAAGAGTAATCCTTTTT

Downstream 100 bases:

>100_bases
AATACAAACTATTCATAATTATCAAAGTAGAAAATTATTTTATGTAGTGTCGCACTAAATCTATCTTATAAAATTGATGA
ATGATAAATTAAAAAATATT

Product: trypsin

Products: NA

Alternate protein names: Trypsin; Prolyl 4-Hydroxylase Alpha Subunit; Mannitol Dehydrogenase; 2OG-Fe(II) Oxygenase Family Oxidoreductase; 2og-Fe(Ii) Oxygenase; 2-Oxoglutarate-Fe(Ii) Oxygenase Family; 2OG-Fe(II) Oxygenase Superfamily; 2OG-Fe(II) Oxygenase Family Protein; 2-Oxoglutarate-Fe(II) Oxygenase Family Protein; Dioxygenase

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKLIGKYKNSGFEAVADGVISFFDRREDLHTNGIAFGQNISLNNDPYKVSTDISLVSIDRSDPEAFAISEVIIRGVNAGL
KKYLEDHSLIRECCPEQSLFVNPIFNLQRYAPGEGFKKWHCDWTISNEATEPVHRVLAWILYCNDVDSGGTEFLWQKHHE
AAERGKLIIFPAGISHIHRGRVNKKDIKTIATGWINAGNFEDYISRLASS

Sequences:

>Translated_210_residues
MKLIGKYKNSGFEAVADGVISFFDRREDLHTNGIAFGQNISLNNDPYKVSTDISLVSIDRSDPEAFAISEVIIRGVNAGL
KKYLEDHSLIRECCPEQSLFVNPIFNLQRYAPGEGFKKWHCDWTISNEATEPVHRVLAWILYCNDVDSGGTEFLWQKHHE
AAERGKLIIFPAGISHIHRGRVNKKDIKTIATGWINAGNFEDYISRLASS
>Mature_210_residues
MKLIGKYKNSGFEAVADGVISFFDRREDLHTNGIAFGQNISLNNDPYKVSTDISLVSIDRSDPEAFAISEVIIRGVNAGL
KKYLEDHSLIRECCPEQSLFVNPIFNLQRYAPGEGFKKWHCDWTISNEATEPVHRVLAWILYCNDVDSGGTEFLWQKHHE
AAERGKLIIFPAGISHIHRGRVNKKDIKTIATGWINAGNFEDYISRLASS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23683; Mature: 23683

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIGKYKNSGFEAVADGVISFFDRREDLHTNGIAFGQNISLNNDPYKVSTDISLVSIDR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCEEEEEECC
SDPEAFAISEVIIRGVNAGLKKYLEDHSLIRECCPEQSLFVNPIFNLQRYAPGEGFKKWH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHCCCCCCCCEEE
CDWTISNEATEPVHRVLAWILYCNDVDSGGTEFLWQKHHEAAERGKLIIFPAGISHIHRG
EEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHC
RVNKKDIKTIATGWINAGNFEDYISRLASS
CCCHHHHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKLIGKYKNSGFEAVADGVISFFDRREDLHTNGIAFGQNISLNNDPYKVSTDISLVSIDR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCEEEEEECC
SDPEAFAISEVIIRGVNAGLKKYLEDHSLIRECCPEQSLFVNPIFNLQRYAPGEGFKKWH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHCCCCCCCCEEE
CDWTISNEATEPVHRVLAWILYCNDVDSGGTEFLWQKHHEAAERGKLIIFPAGISHIHRG
EEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHC
RVNKKDIKTIATGWINAGNFEDYISRLASS
CCCHHHHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA