| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966811
Identifier: 123966811
GI number: 123966811
Start: 1389127
End: 1389759
Strand: Direct
Name: 123966811
Synonym: P9515_15781
Alternate gene names: NA
Gene position: 1389127-1389759 (Clockwise)
Preceding gene: 123966809
Following gene: 123966818
Centisome position: 81.51
GC content: 35.39
Gene sequence:
>633_bases ATGAAACTAATTGGGAAATATAAAAATTCAGGATTTGAGGCTGTAGCTGATGGTGTGATTTCTTTCTTTGATAGACGAGA AGACTTACATACTAATGGTATCGCTTTTGGGCAAAACATCTCCTTAAATAATGATCCTTATAAAGTTTCAACAGATATTA GTCTTGTTTCTATAGACAGATCGGACCCAGAAGCTTTTGCAATATCTGAAGTCATAATTAGAGGGGTTAATGCAGGACTA AAAAAATATCTGGAAGATCACTCATTAATTAGAGAATGCTGCCCAGAACAATCTTTATTTGTTAACCCAATATTTAATTT ACAACGTTATGCACCAGGAGAAGGATTTAAAAAATGGCATTGTGATTGGACTATTAGTAATGAAGCAACGGAACCTGTAC ATAGAGTCTTAGCTTGGATTCTTTATTGTAATGATGTGGATTCAGGCGGAACTGAGTTTCTTTGGCAGAAACATCATGAA GCTGCTGAAAGGGGTAAACTTATTATCTTCCCCGCGGGGATATCTCACATACATCGAGGAAGAGTAAACAAAAAAGATAT AAAAACTATTGCAACTGGTTGGATAAATGCTGGTAATTTTGAAGACTACATTTCACGATTAGCAAGCTCCTAA
Upstream 100 bases:
>100_bases TTCCATTTGTTTACATTAAATAGATAGATAATTAAAATAAATAGTTAACTGAAAGATATGATTAAAGGATAATTTATATT TTTAAAGAGTAATCCTTTTT
Downstream 100 bases:
>100_bases AATACAAACTATTCATAATTATCAAAGTAGAAAATTATTTTATGTAGTGTCGCACTAAATCTATCTTATAAAATTGATGA ATGATAAATTAAAAAATATT
Product: trypsin
Products: NA
Alternate protein names: Trypsin; Prolyl 4-Hydroxylase Alpha Subunit; Mannitol Dehydrogenase; 2OG-Fe(II) Oxygenase Family Oxidoreductase; 2og-Fe(Ii) Oxygenase; 2-Oxoglutarate-Fe(Ii) Oxygenase Family; 2OG-Fe(II) Oxygenase Superfamily; 2OG-Fe(II) Oxygenase Family Protein; 2-Oxoglutarate-Fe(II) Oxygenase Family Protein; Dioxygenase
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MKLIGKYKNSGFEAVADGVISFFDRREDLHTNGIAFGQNISLNNDPYKVSTDISLVSIDRSDPEAFAISEVIIRGVNAGL KKYLEDHSLIRECCPEQSLFVNPIFNLQRYAPGEGFKKWHCDWTISNEATEPVHRVLAWILYCNDVDSGGTEFLWQKHHE AAERGKLIIFPAGISHIHRGRVNKKDIKTIATGWINAGNFEDYISRLASS
Sequences:
>Translated_210_residues MKLIGKYKNSGFEAVADGVISFFDRREDLHTNGIAFGQNISLNNDPYKVSTDISLVSIDRSDPEAFAISEVIIRGVNAGL KKYLEDHSLIRECCPEQSLFVNPIFNLQRYAPGEGFKKWHCDWTISNEATEPVHRVLAWILYCNDVDSGGTEFLWQKHHE AAERGKLIIFPAGISHIHRGRVNKKDIKTIATGWINAGNFEDYISRLASS >Mature_210_residues MKLIGKYKNSGFEAVADGVISFFDRREDLHTNGIAFGQNISLNNDPYKVSTDISLVSIDRSDPEAFAISEVIIRGVNAGL KKYLEDHSLIRECCPEQSLFVNPIFNLQRYAPGEGFKKWHCDWTISNEATEPVHRVLAWILYCNDVDSGGTEFLWQKHHE AAERGKLIIFPAGISHIHRGRVNKKDIKTIATGWINAGNFEDYISRLASS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23683; Mature: 23683
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIGKYKNSGFEAVADGVISFFDRREDLHTNGIAFGQNISLNNDPYKVSTDISLVSIDR CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCEEEEEECC SDPEAFAISEVIIRGVNAGLKKYLEDHSLIRECCPEQSLFVNPIFNLQRYAPGEGFKKWH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHCCCCCCCCEEE CDWTISNEATEPVHRVLAWILYCNDVDSGGTEFLWQKHHEAAERGKLIIFPAGISHIHRG EEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHC RVNKKDIKTIATGWINAGNFEDYISRLASS CCCHHHHHHHHHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKLIGKYKNSGFEAVADGVISFFDRREDLHTNGIAFGQNISLNNDPYKVSTDISLVSIDR CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCEEEEEECC SDPEAFAISEVIIRGVNAGLKKYLEDHSLIRECCPEQSLFVNPIFNLQRYAPGEGFKKWH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHCCCCCCCCEEE CDWTISNEATEPVHRVLAWILYCNDVDSGGTEFLWQKHHEAAERGKLIIFPAGISHIHRG EEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHC RVNKKDIKTIATGWINAGNFEDYISRLASS CCCHHHHHHHHHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA